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B4DFC1 (B4DFC1_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

cDNA FLJ56060, weakly similar to FERM domain-containing protein 4B EMBL BAG57382.1
Gene names
Name:CCDC120 Ensembl ENSP00000474071
OrganismHomo sapiens (Human) [Reference proteome] EMBL BAG57382.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length696 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
B4DFC1 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: B9722ECBDF715B75

FASTA69674,970
        10         20         30         40         50         60 
MRREPRYQGQ VGPDIHTDSE RTLSSHQPRP LDSTKMEVKG QLISSPTFNA PAALFGEAAP 

        70         80         90        100        110        120 
QVKSERLRGL LDRQRTLQEA LSLKLQELRK VCLQEAELTG QLPPECPLEP GERPQLVRRR 

       130        140        150        160        170        180 
PPTARAYPPP HPNQAHHSLC PAEELALEAL EREVSVQQQI AAAARRLALA PDLSTEQRRR 

       190        200        210        220        230        240 
RRQVQADALR RLHELEEQLR DVRARLGLPV LPLPQPLPLS TGSVITTQGV CLGMRLAQLS 

       250        260        270        280        290        300 
QEDVVLHSES SSLSESGASH DNEEPHGCFS LAERPSPPKA WDQLRAVSGG SPERRTPWKP 

       310        320        330        340        350        360 
PPSDLYGDLK SRRNSVASPT SPTRSLPRSA SSFEGRSVPA TPVLTRGAGP QLCKPEGLHS 

       370        380        390        400        410        420 
RQWSGSQDSQ MGFPRADPAS DRASLFVART RRSNSSEALL VDRAAGGGAG SPPAPLAPSA 

       430        440        450        460        470        480 
SGPPVCKSSE VLYERPQPTP AFSSRTAGPP DPPRAARPSS AAPASRGAPR LPPVCGDFLL 

       490        500        510        520        530        540 
DYSLDRGLPR SGGGTGWGEL PPAAEVPGPL SRRDGLLTML PGPPPVYAAD SNSPLLRTKD 

       550        560        570        580        590        600 
PHTRATRTKP CGLPPEAAEG PEVHPNPLLW MPPPTRIPSA GERSGHKNLA LEGLRDWYIR 

       610        620        630        640        650        660 
NSGLAAGPQR RPVLPSVGPP HPPFLHARCY EVGQALYGAP SQAPLPHSRS FTAPPVSGRY 

       670        680        690 
YADFLYPPEL SARLSDLTLE GEQSSSSDTQ TPGTLV 

« Hide

References

« Hide 'large scale' references
[1]"The DNA sequence of the human X chromosome."
Ross M.T., Grafham D.V., Coffey A.J., Scherer S., McLay K., Muzny D., Platzer M., Howell G.R., Burrows C., Bird C.P., Frankish A., Lovell F.L., Howe K.L., Ashurst J.L., Fulton R.S., Sudbrak R., Wen G., Jones M.C. expand/collapse author list , Hurles M.E., Andrews T.D., Scott C.E., Searle S., Ramser J., Whittaker A., Deadman R., Carter N.P., Hunt S.E., Chen R., Cree A., Gunaratne P., Havlak P., Hodgson A., Metzker M.L., Richards S., Scott G., Steffen D., Sodergren E., Wheeler D.A., Worley K.C., Ainscough R., Ambrose K.D., Ansari-Lari M.A., Aradhya S., Ashwell R.I., Babbage A.K., Bagguley C.L., Ballabio A., Banerjee R., Barker G.E., Barlow K.F., Barrett I.P., Bates K.N., Beare D.M., Beasley H., Beasley O., Beck A., Bethel G., Blechschmidt K., Brady N., Bray-Allen S., Bridgeman A.M., Brown A.J., Brown M.J., Bonnin D., Bruford E.A., Buhay C., Burch P., Burford D., Burgess J., Burrill W., Burton J., Bye J.M., Carder C., Carrel L., Chako J., Chapman J.C., Chavez D., Chen E., Chen G., Chen Y., Chen Z., Chinault C., Ciccodicola A., Clark S.Y., Clarke G., Clee C.M., Clegg S., Clerc-Blankenburg K., Clifford K., Cobley V., Cole C.G., Conquer J.S., Corby N., Connor R.E., David R., Davies J., Davis C., Davis J., Delgado O., Deshazo D., Dhami P., Ding Y., Dinh H., Dodsworth S., Draper H., Dugan-Rocha S., Dunham A., Dunn M., Durbin K.J., Dutta I., Eades T., Ellwood M., Emery-Cohen A., Errington H., Evans K.L., Faulkner L., Francis F., Frankland J., Fraser A.E., Galgoczy P., Gilbert J., Gill R., Gloeckner G., Gregory S.G., Gribble S., Griffiths C., Grocock R., Gu Y., Gwilliam R., Hamilton C., Hart E.A., Hawes A., Heath P.D., Heitmann K., Hennig S., Hernandez J., Hinzmann B., Ho S., Hoffs M., Howden P.J., Huckle E.J., Hume J., Hunt P.J., Hunt A.R., Isherwood J., Jacob L., Johnson D., Jones S., de Jong P.J., Joseph S.S., Keenan S., Kelly S., Kershaw J.K., Khan Z., Kioschis P., Klages S., Knights A.J., Kosiura A., Kovar-Smith C., Laird G.K., Langford C., Lawlor S., Leversha M., Lewis L., Liu W., Lloyd C., Lloyd D.M., Loulseged H., Loveland J.E., Lovell J.D., Lozado R., Lu J., Lyne R., Ma J., Maheshwari M., Matthews L.H., McDowall J., McLaren S., McMurray A., Meidl P., Meitinger T., Milne S., Miner G., Mistry S.L., Morgan M., Morris S., Mueller I., Mullikin J.C., Nguyen N., Nordsiek G., Nyakatura G., O'dell C.N., Okwuonu G., Palmer S., Pandian R., Parker D., Parrish J., Pasternak S., Patel D., Pearce A.V., Pearson D.M., Pelan S.E., Perez L., Porter K.M., Ramsey Y., Reichwald K., Rhodes S., Ridler K.A., Schlessinger D., Schueler M.G., Sehra H.K., Shaw-Smith C., Shen H., Sheridan E.M., Shownkeen R., Skuce C.D., Smith M.L., Sotheran E.C., Steingruber H.E., Steward C.A., Storey R., Swann R.M., Swarbreck D., Tabor P.E., Taudien S., Taylor T., Teague B., Thomas K., Thorpe A., Timms K., Tracey A., Trevanion S., Tromans A.C., d'Urso M., Verduzco D., Villasana D., Waldron L., Wall M., Wang Q., Warren J., Warry G.L., Wei X., West A., Whitehead S.L., Whiteley M.N., Wilkinson J.E., Willey D.L., Williams G., Williams L., Williamson A., Williamson H., Wilming L., Woodmansey R.L., Wray P.W., Yen J., Zhang J., Zhou J., Zoghbi H., Zorilla S., Buck D., Reinhardt R., Poustka A., Rosenthal A., Lehrach H., Meindl A., Minx P.J., Hillier L.W., Willard H.F., Wilson R.K., Waterston R.H., Rice C.M., Vaudin M., Coulson A., Nelson D.L., Weinstock G., Sulston J.E., Durbin R.M., Hubbard T., Gibbs R.A., Beck S., Rogers J., Bentley D.R.
Nature 434:325-337(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Cerebellum EMBL BAG57382.1.
[3]Ensembl
Submitted (JUL-2013) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF196779 Genomic DNA. No translation available.
AK294024 mRNA. Translation: BAG57382.1.
RefSeqNP_001156793.2. NM_001163321.2.
UniGeneHs.522643.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

DNASU90060.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000603986; ENSP00000474071; ENSG00000147144.
GeneID90060.
KEGGhsa:90060.
UCSCuc011mmr.3. human.

Organism-specific databases

CTD90060.
HGNCHGNC:28910. CCDC120.
PharmGKBPA145149329.
GenAtlasSearch...

Phylogenomic databases

HOGENOMHOG000231367.
HOVERGENHBG080242.

Gene expression databases

BgeeB4DFC1.

Family and domain databases

InterProIPR021774. DUF3338.
[Graphical view]
PfamPF11819. DUF3338. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi90060.
NextBio76501.

Entry information

Entry nameB4DFC1_HUMAN
AccessionPrimary (citable) accession number: B4DFC1
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: April 16, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.