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Protein
Submitted name:

cDNA FLJ52123, highly similar to Platelet-activating factor acetylhydrolase IB alpha subunit

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionHydrolaseImported

Enzyme and pathway databases

SignaLinkiB4DF38.

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ52123, highly similar to Platelet-activating factor acetylhydrolase IB alpha subunitImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

MaxQBiB4DF38.
PeptideAtlasiB4DF38.
PRIDEiB4DF38.

Expressioni

Gene expression databases

BgeeiENSG00000007168.

Structurei

3D structure databases

ProteinModelPortaliB4DF38.
SMRiB4DF38.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 205WD_REPEATS_REGIONInterPro annotationAdd BLAST205
Repeati17 – 58WDPROSITE-ProRule annotationAdd BLAST42
Repeati59 – 100WDPROSITE-ProRule annotationAdd BLAST42
Repeati129 – 170WDPROSITE-ProRule annotationAdd BLAST42
Repeati171 – 205WDPROSITE-ProRule annotationAdd BLAST35

Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Phylogenomic databases

HOGENOMiHOG000184015.
HOVERGENiHBG103859.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiView protein in InterPro
IPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
PfamiView protein in Pfam
PF00400. WD40. 4 hits.
PRINTSiPR00320. GPROTEINBRPT.
SMARTiView protein in SMART
SM00320. WD40. 4 hits.
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiView protein in PROSITE
PS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 4 hits.
PS50294. WD_REPEATS_REGION. 1 hit.

Sequencei

Sequence statusi: Complete.

B4DF38-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTIKLWDFQG FECIRTMHGH DHNVSSVAIM PNGDHIVSAS RDKTIKMWEV
60 70 80 90 100
QTGYCVKTFT GHREWVRMVR PNQDGTLIAS CSNDQTVRVW VVATKECKAE
110 120 130 140 150
LREHEHVVEC ISWAPESSYS SISEATGSEV GHDNWVRGVL FHSGGKFILS
160 170 180 190 200
CADDKTLRVW DYKNKRCMKT LNAHEHFVTS LDFHKTAPYV VTGSVDQTVK

VWECR
Length:205
Mass (Da):23,418
Last modified:September 23, 2008 - v1
Checksum:iE161B1FF14C42E18
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK293918 mRNA. Translation: BAG57299.1.
UniGeneiHs.77318.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK293918 mRNA. Translation: BAG57299.1.
UniGeneiHs.77318.

3D structure databases

ProteinModelPortaliB4DF38.
SMRiB4DF38.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiB4DF38.
PeptideAtlasiB4DF38.
PRIDEiB4DF38.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOGENOMiHOG000184015.
HOVERGENiHBG103859.

Enzyme and pathway databases

SignaLinkiB4DF38.

Miscellaneous databases

ChiTaRSiPAFAH1B1. human.

Gene expression databases

BgeeiENSG00000007168.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiView protein in InterPro
IPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
PfamiView protein in Pfam
PF00400. WD40. 4 hits.
PRINTSiPR00320. GPROTEINBRPT.
SMARTiView protein in SMART
SM00320. WD40. 4 hits.
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiView protein in PROSITE
PS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 4 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiB4DF38_HUMAN
AccessioniPrimary (citable) accession number: B4DF38
Entry historyiIntegrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: February 15, 2017
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.