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Protein
Submitted name:

cDNA FLJ52123, highly similar to Platelet-activating factor acetylhydrolase IB alpha subunit

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. hydrolase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

SignaLinkiB4DF38.

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ52123, highly similar to Platelet-activating factor acetylhydrolase IB alpha subunitImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PRIDEiB4DF38.

Expressioni

Gene expression databases

BgeeiB4DF38.
ExpressionAtlasiB4DF38. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliB4DF38.
SMRiB4DF38. Positions 1-203.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000184015.
HOVERGENiHBG103859.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 5 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 4 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 4 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DF38-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTIKLWDFQG FECIRTMHGH DHNVSSVAIM PNGDHIVSAS RDKTIKMWEV
60 70 80 90 100
QTGYCVKTFT GHREWVRMVR PNQDGTLIAS CSNDQTVRVW VVATKECKAE
110 120 130 140 150
LREHEHVVEC ISWAPESSYS SISEATGSEV GHDNWVRGVL FHSGGKFILS
160 170 180 190 200
CADDKTLRVW DYKNKRCMKT LNAHEHFVTS LDFHKTAPYV VTGSVDQTVK

VWECR
Length:205
Mass (Da):23,418
Last modified:September 23, 2008 - v1
Checksum:iE161B1FF14C42E18
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK293918 mRNA. Translation: BAG57299.1.
UniGeneiHs.77318.

Genome annotation databases

UCSCiuc010vqz.2. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK293918 mRNA. Translation: BAG57299.1.
UniGeneiHs.77318.

3D structure databases

ProteinModelPortaliB4DF38.
SMRiB4DF38. Positions 1-203.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiB4DF38.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

UCSCiuc010vqz.2. human.

Phylogenomic databases

HOGENOMiHOG000184015.
HOVERGENiHBG103859.

Enzyme and pathway databases

SignaLinkiB4DF38.

Miscellaneous databases

ChiTaRSiPAFAH1B1. human.
NextBioi35471395.

Gene expression databases

BgeeiB4DF38.
ExpressionAtlasiB4DF38. baseline and differential.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 5 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 4 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 4 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: CerebellumImported.

Entry informationi

Entry nameiB4DF38_HUMAN
AccessioniPrimary (citable) accession number: B4DF38
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: April 1, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.