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Protein
Submitted name:

cDNA FLJ58395, highly similar to Excitatory amino acid transporter 1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ58395, highly similar to Excitatory amino acid transporter 1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei72 – 9322HelicalSequence analysisAdd
BLAST
Transmembranei189 – 20820HelicalSequence analysisAdd
BLAST
Transmembranei229 – 25022HelicalSequence analysisAdd
BLAST
Transmembranei262 – 28726HelicalSequence analysisAdd
BLAST
Transmembranei294 – 31320HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PeptideAtlasiB4DF14.

Expressioni

Gene expression databases

BgeeiB4DF14.

Interactioni

Protein-protein interaction databases

IntActiB4DF14. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliB4DF14.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000208776.
HOVERGENiHBG000080.

Family and domain databases

Gene3Di1.10.3860.10. 2 hits.
InterProiIPR001991. Na-dicarboxylate_symporter.
IPR018107. Na-dicarboxylate_symporter_CS.
[Graphical view]
PANTHERiPTHR11958. PTHR11958. 2 hits.
PfamiPF00375. SDF. 1 hit.
[Graphical view]
PRINTSiPR00173. EDTRNSPORT.
SUPFAMiSSF118215. SSF118215. 2 hits.
PROSITEiPS00714. NA_DICARBOXYL_SYMP_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DF14-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKSNGEEPK MGGRMERFQQ GVRKRTLLAK KKVQNITKED VKSYLFRNAF
60 70 80 90 100
VLLTGMAALD SKASGKMGMR AVVYYMTTTI IAVVIGIIIV IIIHPGKGTK
110 120 130 140 150
ENMHREGKIV RVTAADAFLD LIRNMFPPNL VEACFKQFKT NYEKRSFKVP
160 170 180 190 200
IQANETLVGA VINNVSEAME TLTRITEELV PVPGSVNGVN ALGLVVFSMC
210 220 230 240 250
FGFVIGNMKE QGQALREFFD SLNEAIMRLV AVIMWYAPVG ILFLIAGKIV
260 270 280 290 300
EMEDMGVIGG QLAMYTVTVI VGLLIHAVIV LPLLYFLVTR KNPWVFIGGL
310 320 330 340 350
LQALITALGT SSSSATLPIT FKCLEENNGV DKRVTRFVLP VGATINMDGT
360 370 380 390 400
ALYEALAAIF IAQVNNFELN FGQIITISIT ATAASIGAAG IPQAGLVTMV
410 420 430 440 450
IVLTSVGLPT DDITLIIAVD WFLDRLRTTT NVLGDSLGAG IVEHLSRHEL
460 470 480 490
KNRDVEMGNS VIEENEMKKP YQLIAQDNET EKPIDSETKM
Length:490
Mass (Da):53,625
Last modified:September 23, 2008 - v1
Checksum:i5F5CB988BAFAD8F5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK293886 mRNA. Translation: BAG57275.1.
RefSeqiNP_001276868.1. NM_001289939.1.
UniGeneiHs.481918.

Genome annotation databases

GeneIDi6507.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK293886 mRNA. Translation: BAG57275.1.
RefSeqiNP_001276868.1. NM_001289939.1.
UniGeneiHs.481918.

3D structure databases

ProteinModelPortaliB4DF14.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiB4DF14. 1 interaction.

Proteomic databases

PeptideAtlasiB4DF14.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi6507.

Organism-specific databases

CTDi6507.

Phylogenomic databases

HOGENOMiHOG000208776.
HOVERGENiHBG000080.

Miscellaneous databases

GenomeRNAii6507.

Gene expression databases

BgeeiB4DF14.

Family and domain databases

Gene3Di1.10.3860.10. 2 hits.
InterProiIPR001991. Na-dicarboxylate_symporter.
IPR018107. Na-dicarboxylate_symporter_CS.
[Graphical view]
PANTHERiPTHR11958. PTHR11958. 2 hits.
PfamiPF00375. SDF. 1 hit.
[Graphical view]
PRINTSiPR00173. EDTRNSPORT.
SUPFAMiSSF118215. SSF118215. 2 hits.
PROSITEiPS00714. NA_DICARBOXYL_SYMP_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: CerebellumImported.

Entry informationi

Entry nameiB4DF14_HUMAN
AccessioniPrimary (citable) accession number: B4DF14
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 6, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.