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Protein
Submitted name:

LIM and cysteine-rich domains protein 1

Gene

LMCD1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
LIM and cysteine-rich domains protein 1Imported
Submitted name:
cDNA FLJ52480, highly similar to LIM and cysteine-rich domains protein 1Imported
Gene namesi
Name:LMCD1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 3

Organism-specific databases

EuPathDBiHostDB:ENSG00000071282.11.
HGNCiHGNC:6633. LMCD1.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000071282.

PTM / Processingi

Proteomic databases

MaxQBiB4DEY6.

Expressioni

Gene expression databases

BgeeiENSG00000071282.
ExpressionAtlasiB4DEY6. baseline and differential.

Structurei

3D structure databases

SMRiB4DEY6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 94PETInterPro annotationAdd BLAST94
Domaini129 – 194LIM zinc-bindingInterPro annotationAdd BLAST66
Domaini195 – 253LIM zinc-bindingInterPro annotationAdd BLAST59

Keywords - Domaini

LIM domainPROSITE-ProRule annotationSAAS annotation, RepeatSAAS annotation

Phylogenomic databases

eggNOGiENOG410INGI. Eukaryota.
ENOG410ZPX3. LUCA.
GeneTreeiENSGT00550000074438.
HOGENOMiHOG000231628.
HOVERGENiHBG001038.

Family and domain databases

CDDicd09829. PET_testin. 1 hit.
InterProiView protein in InterPro
IPR010442. PET_domain.
IPR033724. PET_testin.
IPR001781. Znf_LIM.
PfamiView protein in Pfam
PF00412. LIM. 2 hits.
PF06297. PET. 1 hit.
SMARTiView protein in SMART
SM00132. LIM. 2 hits.
PROSITEiView protein in PROSITE
PS00478. LIM_DOMAIN_1. 1 hit.
PS50023. LIM_DOMAIN_2. 2 hits.
PS51303. PET. 1 hit.

Sequencei

Sequence statusi: Complete.

B4DEY6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFGMQGDVFG LRATFMEGLQ YMELIPKEKQ PVTGTEGAFY RRRQLMHQLP
60 70 80 90 100
IYDQDPSRCR GLLENELKLM EEFVKQYKSE ALGVGEVALP GQGGLPKEEG
110 120 130 140 150
KQQEKPEGAE TTAATTNGSL SDPSKEVEYV CELCKGAAPP DSPVVYSDRA
160 170 180 190 200
GYNKQWHPTC FVCAKCSEPL VDLIYFWKDG APWCGRHYCE SLRPRCSGCD
210 220 230 240 250
EIIFAEDYQR VEDLAWHRKH FVCEGCEQLL SGRAYIVTKG QLLCPTCSKS

KRS
Length:253
Mass (Da):28,513
Last modified:September 23, 2008 - v1
Checksum:i4688E5A11A609081
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC087859 Genomic DNA. No translation available.
AK293849 mRNA. Translation: BAG57247.1.
RefSeqiNP_001265163.1. NM_001278234.1.
UniGeneiHs.475353.
Hs.732705.

Genome annotation databases

EnsembliENST00000397386; ENSP00000380542; ENSG00000071282.
GeneIDi29995.
UCSCiuc011ate.3. human.

Similar proteinsi

Entry informationi

Entry nameiB4DEY6_HUMAN
AccessioniPrimary (citable) accession number: B4DEY6
Entry historyiIntegrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: September 27, 2017
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported