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B4DER6 (B4DER6_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismHomo sapiens (Human) EMBL BAG57177.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length1075 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the AAA ATPase family. RuleBase RU003651

Sequences

Sequence LengthMass (Da)Tools
B4DER6 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 552FDAF55C371506

FASTA1,075119,603
        10         20         30         40         50         60 
MMKELQTKQL QSNTVGITES NENESEIPVD SSSVASLWTM IGSIFSFQSE KKQETSWGLT 

        70         80         90        100        110        120 
EINAFKNMQS KVVPLDNIFR VCKSQPPSIY NASATSVFHK HCAIHVFPWD QEYFDVEPSF 

       130        140        150        160        170        180 
TVTYGKLVKL LSPKQQQSKT KQNVLSPEKE KQMSEPLDQK KIRSDHNEED EKACVLQVVW 

       190        200        210        220        230        240 
NGLEELNNAI KYTKNVEVLH LGKVWIPDDL RKRLNIEMHA VVRITPVEVT PKIPRSLKLQ 

       250        260        270        280        290        300 
PRENLPKDIS EEDIKTVFYS WLQQSTTTML PLVISEEEFI KLETKDGLKE FSLSIVHSWE 

       310        320        330        340        350        360 
KEKDKNIFLL SPNLLQKTTI QVLLDPMVKE ENSEEIDFIL PFLKLSSLGG VNSLGVSSLE 

       370        380        390        400        410        420 
HITHSLLGRP LSRQLMSLVA GLRNGALLLT GGKGSGKSTL AKAICKEAFD KLDAHVERVD 

       430        440        450        460        470        480 
CKALRGKRLE NIQKTLEVAF SEAVWMQPSV VLLDDLDLIA GLPAVPEHEH SPDAVQSQRL 

       490        500        510        520        530        540 
AHALNDMIKE FISMGSLVAL IATSQSQQSL HPLLVSAQGV HIFQCVQHIQ PPNQEQRCEI 

       550        560        570        580        590        600 
LCNVIKNKLD CDINKFTDLD LQHVAKETGG FVARDFTVLV DRAIHSRLSR QSISTREKLV 

       610        620        630        640        650        660 
LTTLDFQKAL RGFLPASLRS VNLHKPRDLG WDKIGGLHEV RQILMDTIQL PAKYPELFAN 

       670        680        690        700        710        720 
LPIRQRTGIL LYGPPGTGKT LLAGVIARES RMNFISVKGP ELLSKYIGAS EQAVRDIFIR 

       730        740        750        760        770        780 
AQAAKPCILF FDEFESIAPR RGHDNTGVTD RVVNQLLTQL DGVEGLQGVY VLAATSRPDL 

       790        800        810        820        830        840 
IDPALLRPGR LDKCVYCPPP DQVSRLEILN VLSDSLPLAD DVDLQHVASV TDSFTGADLK 

       850        860        870        880        890        900 
ALLYNAQLEA LHGMLLSSGL QDGSSSSDSD LSLSSMVFLN HSSGSDDSAG DGECGLDQSL 

       910        920        930        940        950        960 
VSLEMSEILP DESKFNMYRL YFGSSYESEL GNGTSSDLSS QCLSAPSSMT QDLPGVPGKD 

       970        980        990       1000       1010       1020 
QLFSQPPVLR TASQEGCQEL TQEQRDQLRA DISIIKGRYR SQSGEDESMN QPGPIKTRLA 

      1030       1040       1050       1060       1070 
ISQSHLMTAL GHTRPSISED DWKNFAELYE SFQNPKRRKN QSGTMFRPGQ KVTLA 

« Hide

References

[1]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Cerebellum EMBL BAG57177.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK293757 mRNA. Translation: BAG57177.1.
RefSeqNP_001269607.1. NM_001282678.1.
UniGeneHs.164682.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEB4DER6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5189.
KEGGhsa:5189.

Organism-specific databases

CTD5189.

Phylogenomic databases

HOVERGENHBG008169.
KOK13338.

Gene expression databases

ArrayExpressB4DER6.
BgeeB4DER6.

Family and domain databases

Gene3D3.40.50.300. 2 hits.
InterProIPR003593. AAA+_ATPase.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
IPR027417. P-loop_NTPase.
IPR025653. Pex1.
[Graphical view]
PANTHERPTHR23077:SF12. PTHR23077:SF12. 1 hit.
PfamPF00004. AAA. 2 hits.
[Graphical view]
SMARTSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMSSF52540. SSF52540. 2 hits.
PROSITEPS00674. AAA. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35471294.

Entry information

Entry nameB4DER6_HUMAN
AccessionPrimary (citable) accession number: B4DER6
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: May 14, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.