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B4DER6

- B4DER6_HUMAN

UniProt

B4DER6 - B4DER6_HUMAN

Protein
Submitted name:

cDNA FLJ51800, highly similar to Peroxisome biogenesis factor 1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (23 Sep 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATPase activity, coupled Source: InterPro
    2. ATP binding Source: UniProtKB-KW

    GO - Biological processi

    1. protein targeting to peroxisome Source: InterPro

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    cDNA FLJ51800, highly similar to Peroxisome biogenesis factor 1Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    Subcellular locationi

    GO - Cellular componenti

    1. peroxisomal membrane Source: Ensembl

    PTM / Processingi

    Proteomic databases

    PRIDEiB4DER6.

    Expressioni

    Gene expression databases

    ArrayExpressiB4DER6.
    BgeeiB4DER6.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the AAA ATPase family.UniRule annotation

    Phylogenomic databases

    HOVERGENiHBG008169.
    KOiK13338.

    Family and domain databases

    Gene3Di3.40.50.300. 2 hits.
    InterProiIPR003593. AAA+_ATPase.
    IPR003959. ATPase_AAA_core.
    IPR003960. ATPase_AAA_CS.
    IPR027417. P-loop_NTPase.
    IPR025653. Pex1.
    [Graphical view]
    PANTHERiPTHR23077:SF12. PTHR23077:SF12. 1 hit.
    PfamiPF00004. AAA. 2 hits.
    [Graphical view]
    SMARTiSM00382. AAA. 2 hits.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 2 hits.
    PROSITEiPS00674. AAA. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B4DER6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMKELQTKQL QSNTVGITES NENESEIPVD SSSVASLWTM IGSIFSFQSE     50
    KKQETSWGLT EINAFKNMQS KVVPLDNIFR VCKSQPPSIY NASATSVFHK 100
    HCAIHVFPWD QEYFDVEPSF TVTYGKLVKL LSPKQQQSKT KQNVLSPEKE 150
    KQMSEPLDQK KIRSDHNEED EKACVLQVVW NGLEELNNAI KYTKNVEVLH 200
    LGKVWIPDDL RKRLNIEMHA VVRITPVEVT PKIPRSLKLQ PRENLPKDIS 250
    EEDIKTVFYS WLQQSTTTML PLVISEEEFI KLETKDGLKE FSLSIVHSWE 300
    KEKDKNIFLL SPNLLQKTTI QVLLDPMVKE ENSEEIDFIL PFLKLSSLGG 350
    VNSLGVSSLE HITHSLLGRP LSRQLMSLVA GLRNGALLLT GGKGSGKSTL 400
    AKAICKEAFD KLDAHVERVD CKALRGKRLE NIQKTLEVAF SEAVWMQPSV 450
    VLLDDLDLIA GLPAVPEHEH SPDAVQSQRL AHALNDMIKE FISMGSLVAL 500
    IATSQSQQSL HPLLVSAQGV HIFQCVQHIQ PPNQEQRCEI LCNVIKNKLD 550
    CDINKFTDLD LQHVAKETGG FVARDFTVLV DRAIHSRLSR QSISTREKLV 600
    LTTLDFQKAL RGFLPASLRS VNLHKPRDLG WDKIGGLHEV RQILMDTIQL 650
    PAKYPELFAN LPIRQRTGIL LYGPPGTGKT LLAGVIARES RMNFISVKGP 700
    ELLSKYIGAS EQAVRDIFIR AQAAKPCILF FDEFESIAPR RGHDNTGVTD 750
    RVVNQLLTQL DGVEGLQGVY VLAATSRPDL IDPALLRPGR LDKCVYCPPP 800
    DQVSRLEILN VLSDSLPLAD DVDLQHVASV TDSFTGADLK ALLYNAQLEA 850
    LHGMLLSSGL QDGSSSSDSD LSLSSMVFLN HSSGSDDSAG DGECGLDQSL 900
    VSLEMSEILP DESKFNMYRL YFGSSYESEL GNGTSSDLSS QCLSAPSSMT 950
    QDLPGVPGKD QLFSQPPVLR TASQEGCQEL TQEQRDQLRA DISIIKGRYR 1000
    SQSGEDESMN QPGPIKTRLA ISQSHLMTAL GHTRPSISED DWKNFAELYE 1050
    SFQNPKRRKN QSGTMFRPGQ KVTLA 1075
    Length:1,075
    Mass (Da):119,603
    Last modified:September 23, 2008 - v1
    Checksum:i552FDAF55C371506
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK293757 mRNA. Translation: BAG57177.1.
    RefSeqiNP_001269607.1. NM_001282678.1.
    UniGeneiHs.164682.

    Genome annotation databases

    GeneIDi5189.
    KEGGihsa:5189.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK293757 mRNA. Translation: BAG57177.1 .
    RefSeqi NP_001269607.1. NM_001282678.1.
    UniGenei Hs.164682.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi B4DER6.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 5189.
    KEGGi hsa:5189.

    Organism-specific databases

    CTDi 5189.

    Phylogenomic databases

    HOVERGENi HBG008169.
    KOi K13338.

    Miscellaneous databases

    GenomeRNAii 5189.
    NextBioi 35471294.

    Gene expression databases

    ArrayExpressi B4DER6.
    Bgeei B4DER6.

    Family and domain databases

    Gene3Di 3.40.50.300. 2 hits.
    InterProi IPR003593. AAA+_ATPase.
    IPR003959. ATPase_AAA_core.
    IPR003960. ATPase_AAA_CS.
    IPR027417. P-loop_NTPase.
    IPR025653. Pex1.
    [Graphical view ]
    PANTHERi PTHR23077:SF12. PTHR23077:SF12. 1 hit.
    Pfami PF00004. AAA. 2 hits.
    [Graphical view ]
    SMARTi SM00382. AAA. 2 hits.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 2 hits.
    PROSITEi PS00674. AAA. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "NEDO human cDNA sequencing project focused on splicing variants."
      Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
      , Sugano S., Nomura N., Isogai T.
      Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: CerebellumImported.

    Entry informationi

    Entry nameiB4DER6_HUMAN
    AccessioniPrimary (citable) accession number: B4DER6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.