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B4DER3 (B4DER3_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismHomo sapiens (Human) EMBL BAG57174.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length1101 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11011 EMBL BAG57174.1

Sequences

Sequence LengthMass (Da)Tools
B4DER3 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 18B3D9F51ABE1DBA

FASTA1,101126,200
        10         20         30         40         50         60 
MKWSDNKDDI LKGGDVVRLF HAEQEKFLTC DEHRKKQHVF LRTTGRQSAT SATSSKALWE 

        70         80         90        100        110        120 
VEVVQHDPCR GGAGYWNSLF RFKHLATGHY LAAEVDPDFE EECLEFQPSV DPDHDASRSR 

       130        140        150        160        170        180 
LRNAQEKMVY SLVSVPEGND ISSIFELDPT TLRGGDSLVP RNSYVRLRHL CTNTWVHSTN 

       190        200        210        220        230        240 
IPIDKEEEKP VMLKIGTSPV KEDKEAFAIV PVSPAEVRDL DFANDASKVL GSIAGKLEKG 

       250        260        270        280        290        300 
TITQNERRSV TKLLEDLVYF VTGGTNSGQD VLEVVFSKPN RERQKLMREQ NILKQIFKLL 

       310        320        330        340        350        360 
QAPFTDCGDG PMLRLEELGD QRHAPFRHIC RLCYRVLRHS QQDYRKNQEY IAKQFGFMQK 

       370        380        390        400        410        420 
QIGYDVLAED TITALLHNNR KLLEKHITAA EIDTFVSLVR KNREPRFLDY LSDLCVSMNK 

       430        440        450        460        470        480 
SIPVTQELIC KAVLNPTNAD ILIETKLVLS RFEFEGVSST GENALEAGED EEEVWLFWRD 

       490        500        510        520        530        540 
SNKEIRSKSV RELAQDAKEG QKGDRDVLSY YRYQLNLFAR MCLDRQYLAI NEISGQLDVD 

       550        560        570        580        590        600 
LILRCMSDEN LPYDLRASFC RLMLHMHVDR DPQEQVTPVK YARLWSEIPS EIAIDDYDSS 

       610        620        630        640        650        660 
GASKDEIKER FAQTMEFVEE YLRDVVCQRF PFSDKEKNKL TFEVVNLARN LIYFGFYNFS 

       670        680        690        700        710        720 
DLLRLTKILL AILDCVHVTT IFPISKMAKG EENKGSNVMR SIHGVGELMT QVVLRGGGFL 

       730        740        750        760        770        780 
PMTPMAAAPE GNVKQAEPEK EDIMVMDTKL KIIEILQFIL NVRLDYRISC LLCIFKREFD 

       790        800        810        820        830        840 
ESNSQTSETS SGNSSQEGPS NVPGALDFEH IEEQAEGIFG GSEENTPLDL DDHGGRTFLR 

       850        860        870        880        890        900 
VLLHLTMHDY PPLVSGALQL LFRHFSQRQE VLQAFKQVQL LVTSQDVDNY KQIKQDLDQL 

       910        920        930        940        950        960 
RSIVEKSELW VYKGQGPDET MDGASGENEH KKTEEGNNKP QKHESTSSYN YRVVKEILIR 

       970        980        990       1000       1010       1020 
LSKLCVQESA SVRKSRKQQQ RLLRNMGAHA VVLELLQIPY EKAEDTKMQE IMRLAHEFLQ 

      1030       1040       1050       1060       1070       1080 
NFCAGNQQNQ ALLHKHINLF LNPGILEAVT MQHIFMNNFQ LCSEINERVV QHFVHCIETH 

      1090       1100 
GRNVQYIKFL QTIVKAEGKF I 

« Hide

References

[1]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Cerebellum EMBL BAG57174.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK293752 mRNA. Translation: BAG57174.1.
RefSeqNP_001093422.2. NM_001099952.2.
NP_001161744.1. NM_001168272.1.
NP_002213.5. NM_002222.5.
UniGeneHs.567295.
Hs.715765.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActB4DER3. 1 interaction.

Proteomic databases

PRIDEB4DER3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3708.
KEGGhsa:3708.

Organism-specific databases

CTD3708.
PharmGKBPA29978.

Phylogenomic databases

HOGENOMHOG000007660.
KOK04958.

Family and domain databases

Gene3D1.25.10.30. 2 hits.
InterProIPR000493. InsP3_rcpt-bd.
IPR016093. MIR_motif.
IPR000699. RIH_dom.
IPR015925. Ryanodine_recept-rel.
[Graphical view]
PANTHERPTHR13715. PTHR13715. 1 hit.
PfamPF02815. MIR. 1 hit.
PF01365. RYDR_ITPR. 2 hits.
[Graphical view]
PRINTSPR00779. INSP3RECEPTR.
SMARTSM00472. MIR. 2 hits.
[Graphical view]
SUPFAMSSF100909. SSF100909. 2 hits.
SSF82109. SSF82109. 1 hit.
PROSITEPS50919. MIR. 3 hits.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi3708.
NextBio14533.

Entry information

Entry nameB4DER3_HUMAN
AccessionPrimary (citable) accession number: B4DER3
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: April 16, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.