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Protein
Submitted name:

cDNA FLJ57952, highly similar to CMP-sialic acid transporter

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ57952, highly similar to CMP-sialic acid transporterImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei41 – 6121HelicalSequence analysisAdd
BLAST
Transmembranei73 – 9321HelicalSequence analysisAdd
BLAST
Transmembranei105 – 12824HelicalSequence analysisAdd
BLAST
Transmembranei140 – 15718HelicalSequence analysisAdd
BLAST
Transmembranei163 – 18119HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3131Sequence analysisAdd
BLAST
Chaini32 – 203172Sequence analysisPRO_5002800762Add
BLAST

Proteomic databases

PaxDbiB4DEM1.
PeptideAtlasiB4DEM1.

Expressioni

Gene expression databases

BgeeiB4DEM1.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000358565.

Structurei

3D structure databases

ProteinModelPortaliB4DEM1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2234. Eukaryota.
COG0697. LUCA.
HOVERGENiHBG054025.

Family and domain databases

InterProiIPR007271. Nuc_sug_transpt.
[Graphical view]
PANTHERiPTHR10231. PTHR10231. 1 hit.
PfamiPF04142. Nuc_sug_transp. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DEM1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLNRTLSKLQ WVSVFMLCAG VTLVQWKPAQ ATKVVVEQNP LLGFGAIAIA
60 70 80 90 100
VLCSGFAGVY FEKVLKSSDT SLWVRNIQMY LSGIIVTLAG VYLSDGAEIK
110 120 130 140 150
EKGFFYGYTY YVWFVIFLAS VGGLYTSVVV KYTDNIMKGF SAAAAIVLST
160 170 180 190 200
IASVMLFGLQ ITLTFALGTL LVCVSIYLYG LPRQDTTSIQ QGETASKERV

IGV
Length:203
Mass (Da):22,108
Last modified:September 23, 2008 - v1
Checksum:i57931E6EC4611A24
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK293696 mRNA. Translation: BAG57132.1.
UniGeneiHs.423163.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK293696 mRNA. Translation: BAG57132.1.
UniGeneiHs.423163.

3D structure databases

ProteinModelPortaliB4DEM1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000358565.

Proteomic databases

PaxDbiB4DEM1.
PeptideAtlasiB4DEM1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG2234. Eukaryota.
COG0697. LUCA.
HOVERGENiHBG054025.

Miscellaneous databases

ChiTaRSiSLC35A1. human.

Gene expression databases

BgeeiB4DEM1.

Family and domain databases

InterProiIPR007271. Nuc_sug_transpt.
[Graphical view]
PANTHERiPTHR10231. PTHR10231. 1 hit.
PfamiPF04142. Nuc_sug_transp. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: CerebellumImported.

Entry informationi

Entry nameiB4DEM1_HUMAN
AccessioniPrimary (citable) accession number: B4DEM1
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 6, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.