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B4DDX0

- B4DDX0_HUMAN

UniProt

B4DDX0 - B4DDX0_HUMAN

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Protein
Submitted name: cDNA FLJ59843, highly similar to Integrin alpha-X
Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  1. cell adhesion Source: UniProtKB-KW
  2. defense response to virus Source: Ensembl
  3. integrin-mediated signaling pathway Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

IntegrinUniRule annotationSAAS annotationsImported, ReceptorUniRule annotationSAAS annotations

Keywords - Biological processi

Cell adhesionUniRule annotationSAAS annotations

Enzyme and pathway databases

SignaLinkiB4DDX0.

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ59843, highly similar to Integrin alpha-XImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

  1. external side of plasma membrane Source: Ensembl
  2. integrin complex Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiB4DDX0.

Expressioni

Gene expression databases

ArrayExpressiB4DDX0.
BgeeiB4DDX0.

Family & Domainsi

Sequence similaritiesi

Belongs to the integrin alpha chain family.UniRule annotation
Contains FG-GAP repeats.SAAS annotations

Keywords - Domaini

RepeatSAAS annotations, Transmembrane, Transmembrane helixSAAS annotations

Family and domain databases

InterProiIPR013517. FG-GAP.
IPR013519. Int_alpha_beta-p.
IPR000413. Integrin_alpha.
[Graphical view]
PfamiPF01839. FG-GAP. 1 hit.
[Graphical view]
PRINTSiPR01185. INTEGRINA.
SMARTiSM00191. Int_alpha. 4 hits.
[Graphical view]
PROSITEiPS51470. FG_GAP. 5 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DDX0-1 [UniParc]FASTAAdd to Basket

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MAQEGFSAVF TPDGPVLGAV GSFTWSGGAF LYPPNMSPTF INMSQENVDM    50
RDSYLGYSTE LALWKGVQSL VLGAPRYQHT GKAVIFTQVS RQWRMKAEVT 100
GTQIGSYFGA SLCSVDVDSD GSTDLVLIGA PHYYEQTRGG QVSVCPLPRG 150
WRRWWCDAVL YGEQGHPWGR FGAALTVLGD VNGDKLTDVV IGAPGEEENR 200
GAVYLFHGVL GPSISPSHSQ RIAGSQLSSR LQYFGQALSG GQDLTQDGLV 250
DLAVGARGQV LLLR 264
Length:264
Mass (Da):28,395
Last modified:September 23, 2008 - v1
Checksum:iC879F755D9AE582E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK293367 mRNA. Translation: BAG56881.1.
UniGeneiHs.248472.

Genome annotation databases

UCSCiuc010vfk.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK293367 mRNA. Translation: BAG56881.1 .
UniGenei Hs.248472.

3D structure databases

ModBasei Search...

Proteomic databases

PRIDEi B4DDX0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

UCSCi uc010vfk.1. human.

Enzyme and pathway databases

SignaLinki B4DDX0.

Miscellaneous databases

NextBioi 35471047.

Gene expression databases

ArrayExpressi B4DDX0.
Bgeei B4DDX0.

Family and domain databases

InterProi IPR013517. FG-GAP.
IPR013519. Int_alpha_beta-p.
IPR000413. Integrin_alpha.
[Graphical view ]
Pfami PF01839. FG-GAP. 1 hit.
[Graphical view ]
PRINTSi PR01185. INTEGRINA.
SMARTi SM00191. Int_alpha. 4 hits.
[Graphical view ]
PROSITEi PS51470. FG_GAP. 5 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BladderImported.

Entry informationi

Entry nameiB4DDX0_HUMAN
AccessioniPrimary (citable) accession number: B4DDX0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 9, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

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