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Protein
Submitted name:

cDNA FLJ59843, highly similar to Integrin alpha-X

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Keywordsi

Molecular functionIntegrinUniRule annotationImported, ReceptorUniRule annotation
Biological processCell adhesionUniRule annotation

Enzyme and pathway databases

SignaLinkiB4DDX0

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ59843, highly similar to Integrin alpha-XImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PeptideAtlasiB4DDX0

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati1 – 41FG-GAPPROSITE-ProRule annotationAdd BLAST41
Repeati42 – 93FG-GAPPROSITE-ProRule annotationAdd BLAST52
Repeati94 – 154FG-GAPPROSITE-ProRule annotationAdd BLAST61
Repeati157 – 215FG-GAPPROSITE-ProRule annotationAdd BLAST59
Repeati220 – 264FG-GAPPROSITE-ProRule annotationAdd BLAST45

Sequence similaritiesi

Belongs to the integrin alpha chain family.UniRule annotation

Keywords - Domaini

RepeatSAAS annotation

Phylogenomic databases

eggNOGiENOG410IPBA Eukaryota
ENOG410ZFBE LUCA

Family and domain databases

Gene3Di2.130.10.130, 1 hit
InterProiView protein in InterPro
IPR013517 FG-GAP
IPR013519 Int_alpha_beta-p
IPR000413 Integrin_alpha
IPR028994 Integrin_alpha_N
PfamiView protein in Pfam
PF01839 FG-GAP, 2 hits
PRINTSiPR01185 INTEGRINA
SMARTiView protein in SMART
SM00191 Int_alpha, 4 hits
PROSITEiView protein in PROSITE
PS51470 FG_GAP, 5 hits

Sequencei

Sequence statusi: Complete.

B4DDX0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQEGFSAVF TPDGPVLGAV GSFTWSGGAF LYPPNMSPTF INMSQENVDM
60 70 80 90 100
RDSYLGYSTE LALWKGVQSL VLGAPRYQHT GKAVIFTQVS RQWRMKAEVT
110 120 130 140 150
GTQIGSYFGA SLCSVDVDSD GSTDLVLIGA PHYYEQTRGG QVSVCPLPRG
160 170 180 190 200
WRRWWCDAVL YGEQGHPWGR FGAALTVLGD VNGDKLTDVV IGAPGEEENR
210 220 230 240 250
GAVYLFHGVL GPSISPSHSQ RIAGSQLSSR LQYFGQALSG GQDLTQDGLV
260
DLAVGARGQV LLLR
Length:264
Mass (Da):28,395
Last modified:September 23, 2008 - v1
Checksum:iC879F755D9AE582E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK293367 mRNA Translation: BAG56881.1
UniGeneiHs.248472

Similar proteinsi

Entry informationi

Entry nameiB4DDX0_HUMAN
AccessioniPrimary (citable) accession number: B4DDX0
Entry historyiIntegrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: May 23, 2018
This is version 61 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
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Main funding by: National Institutes of Health