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B4DDX0 (B4DDX0_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismHomo sapiens (Human) EMBL BAG56881.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length264 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Membrane; Single-pass type I membrane protein By similarity RuleBase RU003762.

Sequence similarities

Belongs to the integrin alpha chain family. RuleBase RU003762

Contains FG-GAP repeats. SAAS SAAS013519

Sequences

Sequence LengthMass (Da)Tools
B4DDX0 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: C879F755D9AE582E

FASTA26428,395
        10         20         30         40         50         60 
MAQEGFSAVF TPDGPVLGAV GSFTWSGGAF LYPPNMSPTF INMSQENVDM RDSYLGYSTE 

        70         80         90        100        110        120 
LALWKGVQSL VLGAPRYQHT GKAVIFTQVS RQWRMKAEVT GTQIGSYFGA SLCSVDVDSD 

       130        140        150        160        170        180 
GSTDLVLIGA PHYYEQTRGG QVSVCPLPRG WRRWWCDAVL YGEQGHPWGR FGAALTVLGD 

       190        200        210        220        230        240 
VNGDKLTDVV IGAPGEEENR GAVYLFHGVL GPSISPSHSQ RIAGSQLSSR LQYFGQALSG 

       250        260 
GQDLTQDGLV DLAVGARGQV LLLR 

« Hide

References

[1]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Bladder EMBL BAG56881.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK293367 mRNA. Translation: BAG56881.1.
UniGeneHs.248472.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEB4DDX0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCuc010vfk.1. human.

Enzyme and pathway databases

SignaLinkB4DDX0.

Gene expression databases

ArrayExpressB4DDX0.
BgeeB4DDX0.

Family and domain databases

InterProIPR013517. FG-GAP.
IPR013519. Int_alpha_beta-p.
IPR000413. Integrin_alpha.
[Graphical view]
PfamPF01839. FG-GAP. 1 hit.
[Graphical view]
PRINTSPR01185. INTEGRINA.
SMARTSM00191. Int_alpha. 4 hits.
[Graphical view]
PROSITEPS51470. FG_GAP. 5 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio35471047.

Entry information

Entry nameB4DDX0_HUMAN
AccessionPrimary (citable) accession number: B4DDX0
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 9, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.