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B4DDX0

- B4DDX0_HUMAN

UniProt

B4DDX0 - B4DDX0_HUMAN

Protein
Submitted name:

cDNA FLJ59843, highly similar to Integrin alpha-X

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (23 Sep 2008)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. cell adhesion Source: UniProtKB-KW
    2. defense response to virus Source: Ensembl
    3. integrin-mediated signaling pathway Source: UniProtKB-KW

    Keywords - Molecular functioni

    IntegrinUniRule annotationSAAS annotationImported, ReceptorUniRule annotationSAAS annotation

    Keywords - Biological processi

    Cell adhesionUniRule annotationSAAS annotation

    Enzyme and pathway databases

    SignaLinkiB4DDX0.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    cDNA FLJ59843, highly similar to Integrin alpha-XImported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    Subcellular locationi

    Membrane UniRule annotation; Single-pass type I membrane protein UniRule annotation

    GO - Cellular componenti

    1. external side of plasma membrane Source: Ensembl
    2. integrin complex Source: InterPro

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Proteomic databases

    PRIDEiB4DDX0.

    Expressioni

    Gene expression databases

    ArrayExpressiB4DDX0.
    BgeeiB4DDX0.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the integrin alpha chain family.UniRule annotation
    Contains FG-GAP repeats.SAAS annotation

    Keywords - Domaini

    RepeatSAAS annotation, Transmembrane, Transmembrane helixSAAS annotation

    Family and domain databases

    InterProiIPR013517. FG-GAP.
    IPR013519. Int_alpha_beta-p.
    IPR000413. Integrin_alpha.
    [Graphical view]
    PfamiPF01839. FG-GAP. 1 hit.
    [Graphical view]
    PRINTSiPR01185. INTEGRINA.
    SMARTiSM00191. Int_alpha. 4 hits.
    [Graphical view]
    PROSITEiPS51470. FG_GAP. 5 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B4DDX0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAQEGFSAVF TPDGPVLGAV GSFTWSGGAF LYPPNMSPTF INMSQENVDM    50
    RDSYLGYSTE LALWKGVQSL VLGAPRYQHT GKAVIFTQVS RQWRMKAEVT 100
    GTQIGSYFGA SLCSVDVDSD GSTDLVLIGA PHYYEQTRGG QVSVCPLPRG 150
    WRRWWCDAVL YGEQGHPWGR FGAALTVLGD VNGDKLTDVV IGAPGEEENR 200
    GAVYLFHGVL GPSISPSHSQ RIAGSQLSSR LQYFGQALSG GQDLTQDGLV 250
    DLAVGARGQV LLLR 264
    Length:264
    Mass (Da):28,395
    Last modified:September 23, 2008 - v1
    Checksum:iC879F755D9AE582E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK293367 mRNA. Translation: BAG56881.1.
    UniGeneiHs.248472.

    Genome annotation databases

    UCSCiuc010vfk.1. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK293367 mRNA. Translation: BAG56881.1 .
    UniGenei Hs.248472.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi B4DDX0.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    UCSCi uc010vfk.1. human.

    Enzyme and pathway databases

    SignaLinki B4DDX0.

    Miscellaneous databases

    NextBioi 35471047.

    Gene expression databases

    ArrayExpressi B4DDX0.
    Bgeei B4DDX0.

    Family and domain databases

    InterProi IPR013517. FG-GAP.
    IPR013519. Int_alpha_beta-p.
    IPR000413. Integrin_alpha.
    [Graphical view ]
    Pfami PF01839. FG-GAP. 1 hit.
    [Graphical view ]
    PRINTSi PR01185. INTEGRINA.
    SMARTi SM00191. Int_alpha. 4 hits.
    [Graphical view ]
    PROSITEi PS51470. FG_GAP. 5 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "NEDO human cDNA sequencing project focused on splicing variants."
      Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
      , Sugano S., Nomura N., Isogai T.
      Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: BladderImported.

    Entry informationi

    Entry nameiB4DDX0_HUMAN
    AccessioniPrimary (citable) accession number: B4DDX0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.