Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

B4DDC7 (B4DDC7_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
OrganismHomo sapiens (Human) EMBL BAG56688.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length203 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Cellular componentVirion
   LigandViral nucleoprotein EMBL BAG56688.1
   Molecular functionRibonucleoprotein EMBL BAG56688.1
Gene Ontology (GO)
   Biological_processmRNA splicing, via spliceosome

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribonucleoprotein complex

Inferred from electronic annotation. Source: UniProtKB-KW

viral nucleocapsid

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionnucleotide binding

Inferred from electronic annotation. Source: InterPro

snRNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B4DDC7 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 3FAF78FD47BF9F25

FASTA20322,174
        10         20         30         40         50         60 
MAVPETRPNH TIYIIAKMKG TFVERDRKRE KRKPKSQETP ATKKAVQGGG ATPVVGAVQG 

        70         80         90        100        110        120 
PVPGMPPMTQ APRIMHHMPG QPPYMPPPGM IPPPGLAPGQ IPPGAMPPQQ LMPGQMPPAQ 

       130        140        150        160        170        180 
PLSENPPNHI LFLTNLPEET NELMLSMLFN QFPGFKEVRL VPGRHDIAFV EFDNEVQAGA 

       190        200 
ARDALQGFKI TQNNAMKISF AKK 

« Hide

References

[1]"NEDO human cDNA sequencing project focused on splicing variants."
Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. expand/collapse author list , Sugano S., Nomura N., Isogai T.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK293140 mRNA. Translation: BAG56688.1.
UniGeneHs.466775.

3D structure databases

ProteinModelPortalB4DDC7.
SMRB4DDC7. Positions 2-91, 116-203.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEB4DDC7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

KEGGhsa:6626.

Organism-specific databases

CTD6626.

Phylogenomic databases

HOVERGENHBG000895.
KOK11091.

Family and domain databases

Gene3D3.30.70.330. 1 hit.
InterProIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
IPR024888. U1_snRNP_A/U2_snRNP_B''.
[Graphical view]
PANTHERPTHR10501. PTHR10501. 1 hit.
PfamPF00076. RRM_1. 1 hit.
[Graphical view]
SMARTSM00360. RRM. 1 hit.
[Graphical view]
PROSITEPS50102. RRM. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi6626.
NextBio35470902.

Entry information

Entry nameB4DDC7_HUMAN
AccessionPrimary (citable) accession number: B4DDC7
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: April 16, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.