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B4DDC7

- B4DDC7_HUMAN

UniProt

B4DDC7 - B4DDC7_HUMAN

Protein
Submitted name:

cDNA FLJ52249, highly similar to U1 small nuclear ribonucleoprotein A

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (23 Sep 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. nucleotide binding Source: InterPro
    2. snRNA binding Source: InterPro

    GO - Biological processi

    1. mRNA splicing, via spliceosome Source: InterPro

    Keywords - Molecular functioni

    RibonucleoproteinImported

    Keywords - Ligandi

    Viral nucleoproteinImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    cDNA FLJ52249, highly similar to U1 small nuclear ribonucleoprotein AImported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

    Subcellular locationi

    GO - Cellular componenti

    1. ribonucleoprotein complex Source: UniProtKB-KW
    2. viral nucleocapsid Source: UniProtKB-KW

    Keywords - Cellular componenti

    Virion

    PTM / Processingi

    Proteomic databases

    PRIDEiB4DDC7.

    Structurei

    3D structure databases

    ProteinModelPortaliB4DDC7.
    SMRiB4DDC7. Positions 2-91, 116-203.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOVERGENiHBG000895.

    Family and domain databases

    Gene3Di3.30.70.330. 1 hit.
    InterProiIPR012677. Nucleotide-bd_a/b_plait.
    IPR000504. RRM_dom.
    IPR024888. U1_snRNP_A/U2_snRNP_B''.
    [Graphical view]
    PANTHERiPTHR10501. PTHR10501. 1 hit.
    PfamiPF00076. RRM_1. 1 hit.
    [Graphical view]
    SMARTiSM00360. RRM. 1 hit.
    [Graphical view]
    PROSITEiPS50102. RRM. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B4DDC7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAVPETRPNH TIYIIAKMKG TFVERDRKRE KRKPKSQETP ATKKAVQGGG    50
    ATPVVGAVQG PVPGMPPMTQ APRIMHHMPG QPPYMPPPGM IPPPGLAPGQ 100
    IPPGAMPPQQ LMPGQMPPAQ PLSENPPNHI LFLTNLPEET NELMLSMLFN 150
    QFPGFKEVRL VPGRHDIAFV EFDNEVQAGA ARDALQGFKI TQNNAMKISF 200
    AKK 203
    Length:203
    Mass (Da):22,174
    Last modified:September 23, 2008 - v1
    Checksum:i3FAF78FD47BF9F25
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK293140 mRNA. Translation: BAG56688.1.
    UniGeneiHs.466775.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK293140 mRNA. Translation: BAG56688.1 .
    UniGenei Hs.466775.

    3D structure databases

    ProteinModelPortali B4DDC7.
    SMRi B4DDC7. Positions 2-91, 116-203.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi B4DDC7.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Phylogenomic databases

    HOVERGENi HBG000895.

    Miscellaneous databases

    NextBioi 35470902.

    Family and domain databases

    Gene3Di 3.30.70.330. 1 hit.
    InterProi IPR012677. Nucleotide-bd_a/b_plait.
    IPR000504. RRM_dom.
    IPR024888. U1_snRNP_A/U2_snRNP_B''.
    [Graphical view ]
    PANTHERi PTHR10501. PTHR10501. 1 hit.
    Pfami PF00076. RRM_1. 1 hit.
    [Graphical view ]
    SMARTi SM00360. RRM. 1 hit.
    [Graphical view ]
    PROSITEi PS50102. RRM. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "NEDO human cDNA sequencing project focused on splicing variants."
      Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
      , Sugano S., Nomura N., Isogai T.
      Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiB4DDC7_HUMAN
    AccessioniPrimary (citable) accession number: B4DDC7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 23, 2008
    Last sequence update: September 23, 2008
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.