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B4DDC7

- B4DDC7_HUMAN

UniProt

B4DDC7 - B4DDC7_HUMAN

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Protein
Submitted name:

cDNA FLJ52249, highly similar to U1 small nuclear ribonucleoprotein A

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. nucleotide binding Source: InterPro
  2. snRNA binding Source: InterPro

GO - Biological processi

  1. mRNA splicing, via spliceosome Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

RibonucleoproteinImported

Keywords - Ligandi

Viral nucleoproteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ52249, highly similar to U1 small nuclear ribonucleoprotein AImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

  1. ribonucleoprotein complex Source: UniProtKB-KW
  2. viral nucleocapsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Virion

PTM / Processingi

Proteomic databases

PRIDEiB4DDC7.

Structurei

3D structure databases

ProteinModelPortaliB4DDC7.
SMRiB4DDC7. Positions 2-91, 116-203.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG000895.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
IPR024888. U1_snRNP_A/U2_snRNP_B''.
[Graphical view]
PANTHERiPTHR10501. PTHR10501. 1 hit.
PfamiPF00076. RRM_1. 1 hit.
[Graphical view]
SMARTiSM00360. RRM. 1 hit.
[Graphical view]
PROSITEiPS50102. RRM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B4DDC7-1 [UniParc]FASTAAdd to Basket

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MAVPETRPNH TIYIIAKMKG TFVERDRKRE KRKPKSQETP ATKKAVQGGG    50
ATPVVGAVQG PVPGMPPMTQ APRIMHHMPG QPPYMPPPGM IPPPGLAPGQ 100
IPPGAMPPQQ LMPGQMPPAQ PLSENPPNHI LFLTNLPEET NELMLSMLFN 150
QFPGFKEVRL VPGRHDIAFV EFDNEVQAGA ARDALQGFKI TQNNAMKISF 200
AKK 203
Length:203
Mass (Da):22,174
Last modified:September 23, 2008 - v1
Checksum:i3FAF78FD47BF9F25
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK293140 mRNA. Translation: BAG56688.1.
UniGeneiHs.466775.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK293140 mRNA. Translation: BAG56688.1 .
UniGenei Hs.466775.

3D structure databases

ProteinModelPortali B4DDC7.
SMRi B4DDC7. Positions 2-91, 116-203.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi B4DDC7.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

HOVERGENi HBG000895.

Miscellaneous databases

GenomeRNAii 6626.
NextBioi 35470902.

Family and domain databases

Gene3Di 3.30.70.330. 1 hit.
InterProi IPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
IPR024888. U1_snRNP_A/U2_snRNP_B''.
[Graphical view ]
PANTHERi PTHR10501. PTHR10501. 1 hit.
Pfami PF00076. RRM_1. 1 hit.
[Graphical view ]
SMARTi SM00360. RRM. 1 hit.
[Graphical view ]
PROSITEi PS50102. RRM. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "NEDO human cDNA sequencing project focused on splicing variants."
    Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T.
    , Sugano S., Nomura N., Isogai T.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB4DDC7_HUMAN
AccessioniPrimary (citable) accession number: B4DDC7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: September 3, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

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