B4DDC7 (B4DDC7_HUMAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: cDNA FLJ52249, highly similar to U1 small nuclear ribonucleoprotein A EMBL BAG56688.1
Organism	Homo sapiens (Human) EMBL BAG56688.1
Taxonomic identifier	9606 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	203 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Cellular component	Virion
Ligand	Viral nucleoprotein EMBL BAG56688.1
Molecular function	Ribonucleoprotein EMBL BAG56688.1
Gene Ontology (GO)
Biological_process	mRNA splicing, via spliceosome Inferred from electronic annotation. Source: InterPro
Cellular_component	ribonucleoprotein complex Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	nucleotide binding Inferred from electronic annotation. Source: InterPro snRNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B4DDC7 [UniParc]. Last modified September 23, 2008. Version 1. Checksum: 3FAF78FD47BF9F25	FASTA	203	22,174
	10 20 30 40 50 60 MAVPETRPNH TIYIIAKMKG TFVERDRKRE KRKPKSQETP ATKKAVQGGG ATPVVGAVQG 70 80 90 100 110 120 PVPGMPPMTQ APRIMHHMPG QPPYMPPPGM IPPPGLAPGQ IPPGAMPPQQ LMPGQMPPAQ 130 140 150 160 170 180 PLSENPPNHI LFLTNLPEET NELMLSMLFN QFPGFKEVRL VPGRHDIAFV EFDNEVQAGA 190 200 ARDALQGFKI TQNNAMKISF AKK

References

[1]

"NEDO human cDNA sequencing project focused on splicing variants." Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. , Sugano S., Nomura N., Isogai T. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AK293140 mRNA. Translation: BAG56688.1.
IPI	IPI00909847.
UniGene	Hs.466775.
3D structure databases
ProteinModelPortal	B4DDC7.
SMR	B4DDC7. Positions 2-91, 116-203.
ModBase	Search...
Protein-protein interaction databases
STRING	B4DDC7.
Proteomic databases
PRIDE	B4DDC7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
HOVERGEN	HBG000895.
Gene expression databases
ArrayExpress	B4DDC7.
Family and domain databases
Gene3D	3.30.70.330. 1 hit.
InterPro	IPR012677. Nucleotide-bd_a/b_plait. IPR000504. RRM_dom. IPR024888. U1_snRNP_A/U2_snRNP_B''. [Graphical view]
PANTHER	PTHR10501. PTHR10501. 1 hit.
Pfam	PF00076. RRM_1. 1 hit. [Graphical view]
SMART	SM00360. RRM. 1 hit. [Graphical view]
PROSITE	PS50102. RRM. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	35470902.

Entry information

Entry name

B4DDC7_HUMAN

Accession

Primary (citable) accession number: B4DDC7

Entry history

Integrated into UniProtKB/TrEMBL:	September 23, 2008
Last sequence update:	September 23, 2008
Last modified:	April 3, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.