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B3YRJ7 (B3YRJ7_BACCE) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Deoxyribose-phosphate aldolase HAMAP MF_00114
Short name=DERA HAMAP MF_00114
EC=4.1.2.4 HAMAP MF_00114
Alternative name(s):
2-deoxy-D-ribose 5-phosphate aldolase HAMAP MF_00114
Phosphodeoxyriboaldolase HAMAP MF_00114
Gene names
Name:dra EMBL EDX57765.1
Synonyms:deoC HAMAP MF_00114
ORF Names:BCW_1850 EMBL EDX57765.1
OrganismBacillus cereus W EMBL EDX57765.1
Taxonomic identifier405917 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus › Bacillus cereus group

Protein attributes

Sequence length223 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. HAMAP MF_00114 SAAS SAAS022979

Catalytic activity

2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. HAMAP MF_00114 SAAS SAAS022979

Pathway

Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. HAMAP MF_00114 SAAS SAAS022979

Subcellular location

Cytoplasm By similarity HAMAP MF_00114 SAAS SAAS022979.

Sequence similarities

Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. HAMAP MF_00114

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1521Schiff-base intermediate with acetaldehyde By similarity HAMAP MF_00114
Active site1811 By similarity HAMAP MF_00114

Sequences

Sequence LengthMass (Da)Tools
B3YRJ7 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 2A98ABB54B10BA39

FASTA22323,411
        10         20         30         40         50         60 
MNIAKLIDHT ILKANTTKED VMKVIEEAKE YKFASVCINP TWVKLAAEEL AGHDVDVCTV 

        70         80         90        100        110        120 
IGFPLGASTT ETKAFETKDA IAKGATEVDM VINVGALKDG DNELVEKDIY EVVQAAKGKA 

       130        140        150        160        170        180 
LVKVIIETCL LTDEEKVRAC ELSVKAGADF VKTSTGFSTG GATAEDIALM RKTVGPNVGV 

       190        200        210        220 
KASGGVRTRE DAEKMVAAGA SRVGASASVA IVLNDAKGAT DNY

« Hide

References

[1]"Genome sequence of Bacillus cereus W."
Dodson R.J., Durkin A.S., Rosovitz M.J., Rasko D.A., Ravel J., Sutton G.
Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: W EMBL EDX57765.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		ABCZ02000003 Genomic DNA. Translation: EDX57765.1.

3D structure databases

ProteinModelPortalB3YRJ7.
SMRB3YRJ7. Positions 2-213.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

PATRIC25108199. VBIBacCer31393_1385.

Family and domain databases

HAMAPMF_00114. DeoC_type1.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR011343. DeoC.
IPR002915. DeoC/AroFGH_arch.
IPR022979. Deoxyribose_phosphate_aldo_1.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
PANTHERPTHR10889. DeoC. 1 hit.
PfamPF01791. DeoC. 1 hit.
[Graphical view]
PIRSFPIRSF001357. DeoC. 1 hit.
TIGRFAMsTIGR00126. DeoC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3YRJ7_BACCE
AccessionPrimary (citable) accession number: B3YRJ7
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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