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B3WHK4 (B3WHK4_ECOLX) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Agmatinase HAMAP MF_01418
EC=3.5.3.11 HAMAP MF_01418
Alternative name(s):
Agmatine ureohydrolase HAMAP MF_01418
Gene names
Name:speB HAMAP MF_01418 EMBL EDX31890.1
ORF Names:EcB171_1628 EMBL EDX31890.1
OrganismEscherichia coli B171 EMBL EDX31890.1
Taxonomic identifier344601 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length306 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the formation of putrescine from agmatine By similarity. HAMAP MF_01418 SAAS SAAS023696

Catalytic activity

Agmatine + H2O = putrescine + urea. SAAS SAAS023696 HAMAP MF_01418

Cofactor

Manganese By similarity. SAAS SAAS023696 HAMAP MF_01418

Pathway

Amine and polyamine biosynthesis; putrescine biosynthesis via agmatine pathway; putrescine from agmatine: step 1/1. HAMAP MF_01418

Sequence similarities

Belongs to the arginase family. Agmatinase subfamily. HAMAP MF_01418

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding1261Manganese By similarity HAMAP MF_01418
Metal binding1491Manganese By similarity HAMAP MF_01418
Metal binding1511Manganese By similarity HAMAP MF_01418
Metal binding1531Manganese By similarity HAMAP MF_01418
Metal binding2301Manganese By similarity HAMAP MF_01418
Metal binding2321Manganese By similarity HAMAP MF_01418

Sequences

Sequence LengthMass (Da)Tools
B3WHK4 [UniParc].

Last modified September 23, 2008. Version 1.
Checksum: 48208BF2CF155570

FASTA30633,557
        10         20         30         40         50         60 
MSTLGHQYDN SLVSNAFGFL RLPMNFQPYD SDADWVITGV PFDMATSGRA GGRHGPAAIR 

        70         80         90        100        110        120 
QVSTNLAWEH NRFPWNFDMR ERLNVVDCGD LVYAFGDARE MSEKLQAHAE KLLAAGKRML 

       130        140        150        160        170        180 
SFGGDHFVTL PLLRAHAKHF GKMALVHFDA HTDTYANGCE FDHGTMFYTA PKEGLIDPNH 

       190        200        210        220        230        240 
SVQIGIRTEF DKDNGFTVLD ACQVNDRSVD DVIAQVKQIV GDMPVYLTFD IDCLDPAFAP 

       250        260        270        280        290        300 
GTGTPVIGGL TSDRAIKLVR GLKDLNIVGM DVVEVAPAYD QSEITALAAA TLALEMLYIQ 


AAKKGE

« Hide

References

[1]Rasko D.A., Rosovitz M.J., Kaper J.B., Myers G.S.A., Sheshadri R., Cer R.Z., Jiang L., Ravel J.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: B171 EMBL EDX31890.1.
[2]Rasko D., Rosovitz M., Myers G., Seshadri R., Cer R., Jiang L., Ravel J., Fricke W.F., Sebastian Y.
Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: B171 EMBL EDX31890.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AAJX02000002 Genomic DNA. Translation: EDX31890.1.

3D structure databases

ProteinModelPortalB3WHK4.
SMRB3WHK4. Positions 12-304.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

PATRIC31228452. VBIEscCol100091_0587.

Family and domain databases

HAMAPMF_01418. SpeB.
[Tree]
InterProIPR023694. Agmatinase.
IPR005925. Agmatinase-rel.
IPR006035. Ureohydrolase.
IPR023696. Ureohydrolase_domain.
IPR020855. Ureohydrolase_Mn_BS.
[Graphical view]
Gene3DG3DSA:3.40.800.10. Ureohydrolase. 1 hit.
PANTHERPTHR11358. Ureohydrolase. 1 hit.
PfamPF00491. Arginase. 1 hit.
[Graphical view]
PIRSFPIRSF036979. Arginase. 1 hit.
TIGRFAMsTIGR01230. Agmatinase. 1 hit.
PROSITEPS01053. ARGINASE_1. 1 hit.
PS51409. ARGINASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3WHK4_ECOLX
AccessionPrimary (citable) accession number: B3WHK4
Entry history
Integrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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