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B3W9A1 (GLGA_LACCB) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:LCABL_22030
OrganismLactobacillus casei (strain BL23) [Complete proteome] [HAMAP]
Taxonomic identifier543734 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

Protein attributes

Sequence length481 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 481481Glycogen synthase HAMAP-Rule MF_00484
PRO_1000126082

Sites

Binding site161ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B3W9A1 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 079C74DEC1C6D7CB

FASTA48153,996
        10         20         30         40         50         60 
MLKVLFTAAE SAPFYKTGGL GDVTYALPKA IKKQGVDIRV AIPFYEKKFP AKYLPKVKDL 

        70         80         90        100        110        120 
THFTLEMDGR PVYVGLKTIK LGDVTYYLID NRQYFDRDGL YGYWDDGGRF GYFQMAVIEM 

       130        140        150        160        170        180 
LQVIEWIPDV IHANDWHTAF IPVLLKEKYG WIKPYQQIKT QLTIHNLQFQ GWFPPSTLAT 

       190        200        210        220        230        240 
VFGIGREGFN DDGFGQDGSI NWLKGGINYA DLVSTVSPSY AKEIQTPAFG EHLDGTLRKQ 

       250        260        270        280        290        300 
SGKLVGILNG IDSEVYNPAT DQNLAYNYDA KNLAGKAKDK KALQDEMHLP KRTDPLFAMV 

       310        320        330        340        350        360 
SRLTRQKGAD LLVDALENFL VQNNVQVVVL GTGDQDLEED LSSLQDRFPG QLAVRIDFDE 

       370        380        390        400        410        420 
GLAQRIYAGA DYFMMPSAFE PSGLAQMMAM RYGTLPIVHE TGGLRDSVLA YNAETGAGDG 

       430        440        450        460        470        480 
FSFWDYNAGV LTNILRMAKS VYADQPKVYA KLQQHAMVKD FDWHHSAAEY LKGYQRILGK 


A 

« Hide

References

[1]"Lactobacillus casei BL23 complete genome sequence."
Maze A., Boel G., Bourand A., Loux V., Gibrat J.F., Zuniga M., Hartke A., Deutscher J.
Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BL23.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FM177140 Genomic DNA. Translation: CAQ67270.1.
RefSeqYP_001988128.1. NC_010999.1.

3D structure databases

ProteinModelPortalB3W9A1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING543734.LCABL_22030.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAQ67270; CAQ67270; LCABL_22030.
GeneID6405911.
KEGGlcb:LCABL_22030.
PATRIC22213837. VBILacCas89204_2092.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMAPYHDESQ.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycLCAS543734:GCHL-2174-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_LACCB
AccessionPrimary (citable) accession number: B3W9A1
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: September 2, 2008
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways