B3W999 (B3W999_LACCB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-amylase EMBL CAQ67268.1
EC=3.2.1.1 EMBL CAQ67268.1

Gene names

Name:	amy1 EMBL CAQ67268.1
Ordered Locus Names:	LCABL_22010

Organism

Lactobacillus casei (strain BL23) [Complete proteome] [HAMAP] EMBL CAQ67268.1

Taxonomic identifier

543734 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length	592 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL CAQ67268.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-amylase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3W999 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: DF0474C2AE2975F4	FASTA	592	66,463
	10 20 30 40 50 60 MFQFDSFTDH RPFGAVQKGM AVTLTAQADG AVTQATLVIM PDEHCDQTQS LPMTKSPNGY 70 80 90 100 110 120 TVTFTPPNAG LWFYHFELQS DNGRERFGAV GGGFGGLGQL YPENVDVVNY QMTVVTACDP 130 140 150 160 170 180 VPAWYQNARF YHIFVDRFNN GNADGHVNAP KENSFLYGRK TDRPMYIRGN DGEIIRWDFY 190 200 210 220 230 240 GGNLTGIQQK LPLLAARGIN ALYLSPIFQA RSNHRYDTGD YFAIDEVLGS LHDFKQFLAA 250 260 270 280 290 300 AHQLGMHVIL DGVFNHVGAD SRYFNAVNEY SDVGAANSLD SPYASWFSFK RFPDDYNSWW 310 320 330 340 350 360 GVKDLPAINK DNQDFHDFIA AKKGSVISYW TDLGVDGWRL DVADELMDDF IRQIRSTLDQ 370 380 390 400 410 420 FPERVLIGEV WEDASNKQAY GKRRQYFEGG ELNAVMNYPL RSMLIDLTNG QLNAAGFVRQ 430 440 450 460 470 480 LMTLKENYPT NAFAFNFNNI GSHDTPRILT MLDGDRRKLQ FIVSLFYWLP GVPCLYYGDE 490 500 510 520 530 540 AGLTGGKDPD NRAFYPWGHE DQAVLDIYQI ALQTRIDQPA LAAGAAFFPF TFEDSFGFVR 550 560 570 580 590 QNDTQTLVVL ANPTGSPQVL QDPHAELVPK SLRALLPVGT MVPAGGVIWQ QI

References

[1]

"Complete genome sequence of the probiotic Lactobacillus casei strain BL23." Maze A., Boel G., Zuniga M., Bourand A., Loux V., Yebra M.J., Monedero V., Correia K., Jacques N., Beaufils S., Poncet S., Joyet P., Milohanic E., Casaragola S., Auffray Y., Perez-Martinez G., Gibrat J.F., Zagorec M. , Francke C., Hartke A., Deutscher J. J. Bacteriol. 192:2647-2648(2010) Cited for: NUCLEOTIDE SEQUENCE. Strain: BL23 EMBL CAQ67268.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FM177140 Genomic DNA. Translation: CAQ67268.1.
RefSeq	YP_001988126.1. NC_010999.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B3W999.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6405521.
GenomeReviews	Gene locus LCABL_22010 in contig FM177140_GR.
KEGG	lcb:LCABL_22010.
PATRIC	22213833. VBILacCas89204_2090.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG304832.
OMA	FNNIGSH.
ProtClustDB	CLSK642618.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR006047. Glyco_hydro_13_cat_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3W999_LACCB

Accession

Primary (citable) accession number: B3W999

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)