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B3VI72 (B3VI72_BACPF) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Alanine racemase RuleBase RU004247

EC=5.1.1.1 RuleBase RU004247
Gene names
Name:dadX EMBL ACE78171.1
OrganismBacillus pseudofirmus EMBL ACE78171.1
Taxonomic identifier79885 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length369 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU004247 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247

Sequence similarities

Belongs to the alanine racemase family.

Ontologies

Keywords
   LigandPyridoxal phosphate SAAS SAAS020622
   Molecular functionIsomerase SAAS SAAS020622 EMBL ACE78171.1
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue3691 EMBL ACE78171.1

Sequences

Sequence LengthMass (Da)Tools
B3VI72 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 6AB6A9FCF9D85728

FASTA36940,323
        10         20         30         40         50         60 
MKTSSFRNTY AQISLQALKE NAASFKASLQ SPACRLMAVV KGDGYGHGAV AAASSALNGG 

        70         80         90        100        110        120 
ADYLGVAILD EAIELRDAGV EAPILVLGYT SPHALREAIS RNITLTVFST DVRDALLEVA 

       130        140        150        160        170        180 
SEAESPIKVH IKTETGMGRV GVQTKEELLD VMTPLYHHNN IEVEGIFTHF AEADNLQSTY 

       190        200        210        220        230        240 
TDEQFARFLS FIEAIEKDDM HVPIKHCCNS AGTLFHKDKH LDMVRVGISL YGLRPDVSLE 

       250        260        270        280        290        300 
FPIELTQAMR LFSSIVSLRK LPEGSSISYG RTHKLSSEKV VATMPIGYAD GLSRALSNKG 

       310        320        330        340        350        360 
FVTLHGQKAP ILGRVCMDQT MIDVTDIPDA ALGDHVEFPI DEMAELTGTI NYEIVCAVSK 


RVPRYYEEN 

« Hide

References

[1]"Characterization of endogenous pyridoxal 5'-phosphate-dependent alanine racemase from Bacillus pseudofirmus OF4."
Ju J., Xu S., Wen J., Li G., Ohnishi K., Xue Y., Ma Y.
J. Biosci. Bioeng. 107:225-229(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: OF4 EMBL ACE78171.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EU751624 Genomic DNA. Translation: ACE78171.1.
RefSeqYP_003426901.1. NC_013791.2.

3D structure databases

ProteinModelPortalB3VI72.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8766985.
KEGGbpf:BpOF4_09770.

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3VI72_BACPF
AccessionPrimary (citable) accession number: B3VI72
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: June 11, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)