B3VI72 (B3VI72_BACPF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Name:

dadX EMBL ACE78171.1

Organism

Bacillus pseudofirmus EMBL ACE78171.1

Taxonomic identifier

79885 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	369 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622 RuleBase RU004247
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL ACE78171.1
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	369	1	EMBL ACE78171.1

Sequences

	Sequence		Length	Mass (Da)
	B3VI72 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 6AB6A9FCF9D85728	FASTA	369	40,323
	10 20 30 40 50 60 MKTSSFRNTY AQISLQALKE NAASFKASLQ SPACRLMAVV KGDGYGHGAV AAASSALNGG 70 80 90 100 110 120 ADYLGVAILD EAIELRDAGV EAPILVLGYT SPHALREAIS RNITLTVFST DVRDALLEVA 130 140 150 160 170 180 SEAESPIKVH IKTETGMGRV GVQTKEELLD VMTPLYHHNN IEVEGIFTHF AEADNLQSTY 190 200 210 220 230 240 TDEQFARFLS FIEAIEKDDM HVPIKHCCNS AGTLFHKDKH LDMVRVGISL YGLRPDVSLE 250 260 270 280 290 300 FPIELTQAMR LFSSIVSLRK LPEGSSISYG RTHKLSSEKV VATMPIGYAD GLSRALSNKG 310 320 330 340 350 360 FVTLHGQKAP ILGRVCMDQT MIDVTDIPDA ALGDHVEFPI DEMAELTGTI NYEIVCAVSK RVPRYYEEN

References

[1]

"Characterization of endogenous pyridoxal 5'-phosphate-dependent alanine racemase from Bacillus pseudofirmus OF4." Ju J., Xu S., Wen J., Li G., Ohnishi K., Xue Y., Ma Y. J. Biosci. Bioeng. 107:225-229(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: OF4 EMBL ACE78171.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	EU751624 Genomic DNA. Translation: ACE78171.1.
RefSeq	YP_003426901.1. NC_013791.2.
3D structure databases
ProteinModelPortal	B3VI72.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8766985.
KEGG	bpf:BpOF4_09770.
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3VI72_BACPF

Accession

Primary (citable) accession number: B3VI72

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	March 6, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)