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B3U3D9 (B3U3D9_PEDHE) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 4. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Heparinase I EMBL ACB38160.1
EC=4.2.2.7 EMBL ACB38160.1
OrganismPedobacter heparinus (Flavobacterium heparinum) EMBL ACB38160.1
Taxonomic identifier984 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Sphingobacteriia › Sphingobacteriales › Sphingobacteriaceae › Pedobacter

Protein attributes

Sequence length363 AA.
Sequence statusFragment.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ACB38160.1
Gene Ontology (GO)
   Molecular functionheparin lyase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL ACB38160.1
Non-terminal residue3631 EMBL ACB38160.1

Sequences

Sequence LengthMass (Da)Tools
B3U3D9 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 55DB3A772D8F3BB0

FASTA36341,363
        10         20         30         40         50         60 
QQKKSGNIPY RVNVQADSAK QSEIIDNKWV AVGINKPYAL QYDDKLRFNG KPSYRFELKA 

        70         80         90        100        110        120 
EDNSLEGYAA GETKGRIELS YSYATTNDFK KFPPSVYQNA QKLKTVYHYG KGICEQGSSR 

       130        140        150        160        170        180 
SYTFSVYIPS SFPDNATTIF AQWHGAPSRT LVATPEGEIK TLSIEEFLAL YDRMIFKKNI 

       190        200        210        220        230        240 
AHDKVEKKDK DGKITYVAGK PNGWKVEQGG YPPLAFGFSK GYFYIKANSD RQWLTDKADR 

       250        260        270        280        290        300 
NNANPENSEV MKPYSSEYKT STIAYKMPFA QFPKDCWITF DVAIDWTKYG KEANTILKPG 

       310        320        330        340        350        360 
KLDVMMTYTK NKKPQKAHIV NQQEILIGRN DDDGYYFKFG IYRVGNSTVP VTYNLSGYSE 


TAR

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References

[1]"Secreted expression of heparinase I in Bacillus subtilis WB600."
Sun Y., Wang F.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Sdu-1 EMBL ACB38160.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		EU541216 Genomic DNA. Translation: ACB38160.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyPL13. Polysaccharide Lyase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameB3U3D9_PEDHE
AccessionPrimary (citable) accession number: B3U3D9
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: December 14, 2011
This is version 4 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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