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B3TMR1 (B3TMR1_9ACTO) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
ORF Names:KijD3 EMBL ACB46491.1
OrganismActinomadura kijaniata EMBL ACB46491.1
Taxonomic identifier46161 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptosporangineaeThermomonosporaceaeActinomadura

Protein attributes

Sequence length437 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the acyl-CoA dehydrogenase family. RuleBase RU004309

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding141 – 1433FMN PDB 4KCF
Nucleotide binding383 – 3853FMN PDB 4KCF

Sites

Binding site1711FMN PDB 4KCF

Sequences

Sequence LengthMass (Da)Tools
B3TMR1 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 5ACFDC5E754820DB

FASTA43746,240
        10         20         30         40         50         60 
MPPWTARQDS TTGLYAPVTP AGRVLLDRLA AHLPRIRSTA AEHDRDGTFP TDTFDALRKD 

        70         80         90        100        110        120 
GLMGATVPAE LGGLGVDRLY DVAVALLAVA RADASTALAL HMQLSRGLTL GYEWRHGDER 

       130        140        150        160        170        180 
ARTLAERILR GMVAGDAVVC SGIKDHHTAV TTLRPDGAGG WLLSGRKTLV SMAPVGTHFV 

       190        200        210        220        230        240 
INARTDGTDG PPRLASPVVT RDTPGFTVLD NWDGLGMRAS GTVDIVFDDC PIPADHVLMR 

       250        260        270        280        290        300 
DPVGARNDAV LAGQTVSSVS VLGVYVGVAQ AAYDTAVAAL ERRPEPPQAA ALTLVAEIDS 

       310        320        330        340        350        360 
RLYALRATAG SALTAADALS ADLSGDMDER GRQMMRHFQC AKLAVNRLAP EIVSDCLSLV 

       370        380        390        400        410        420 
GGASYTAGHP LARLLRDVQA GRFMQPYAYV DAVDFLSAQA LGIERDNNYM STWAKRSGGN 

       430 
GKSADAAGPR RPTPTSR 

« Hide

References

[1]"Elucidation of the kijanimicin gene cluster: insights into the biosynthesis of spirotetronate antibiotics and nitrosugars."
Zhang H., White-Phillip J.A., Melancon C.E., Kwon H.-J., Yu W.-L., Liu H.-W.
J. Am. Chem. Soc. 129:14670-14683(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"X-ray structure of kijd3, a key enzyme involved in the biosynthesis of D-kijanose."
Bruender N.A., Thoden J.B., Holden H.M.
Biochemistry 49:3517-3524(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.05 ANGSTROMS).
[3]"Active site architecture of a sugar N-oxygenase."
Thoden J.B., Branch M.C., Zimmer A.L., Bruender N.A., Holden H.M.
Biochemistry 52:3191-3193(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) IN COMPLEX WITH FMN.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EU301739 Genomic DNA. Translation: ACB46491.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3M9VX-ray2.05A1-437[»]
4KCFX-ray2.10A1-437[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D1.10.540.10. 1 hit.
2.40.110.10. 1 hit.
InterProIPR006091. Acyl-CoA_Oxase/DH_cen-dom.
IPR009075. AcylCo_DH/oxidase_C.
IPR013786. AcylCoA_DH/ox_N.
IPR009100. AcylCoA_DH/oxidase_NM_dom.
[Graphical view]
PfamPF00441. Acyl-CoA_dh_1. 1 hit.
PF02770. Acyl-CoA_dh_M. 1 hit.
PF02771. Acyl-CoA_dh_N. 1 hit.
[Graphical view]
SUPFAMSSF47203. SSF47203. 1 hit.
SSF56645. SSF56645. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3TMR1_9ACTO
AccessionPrimary (citable) accession number: B3TMR1
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: June 11, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)