B3STU3 (B3STU3_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ChaC, cation transport regulator-like 1 (E. coli) (Predicted) EMBL EDL79903.1

Submitted name:
Neuroprotective protein 7 EMBL ABX10438.1
Submitted name:
Uncharacterized protein Ensembl ENSRNOP00000019392

Gene names

Name:	Chac1 RGD 1307153 Ensembl ENSRNOP00000019392
Synonyms:	Chac1_predicted EMBL EDL79903.1
ORF Names:	rCG_27393 EMBL EDL79903.1

Organism

Rattus norvegicus (Rat) EMBL ABX10438.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	222 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	B3STU3 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 3F6D2CDFA14BA3FF	FASTA	222	24,457
	10 20 30 40 50 60 MKQESAAQST PPPSLSPAPS AQPSWEDGDP QALWIFGYGS LVWKPDFAYS DSRVGFVRGY 70 80 90 100 110 120 SRRFWQGDTF HRGSDKMPGR VVTLLEDHEG CTWGVAYQVR GEQVSEALKY LNVREAVLGG 130 140 150 160 170 180 YDTKEVTFYP QDTPDQPLTA LAYVATPQNP GYLGPAPEEV IATQILACRG FSGHNLEYLL 190 200 210 220 RLADFMQLCG PQAQDEHLEA IVDAVGSLLP CSYLSEQPLA LI

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Functional identification of neuroprotective molecules." Dai C., Liang D., Li H., Sasaki M., Dawson T.M., Dawson V.L. PLoS ONE 5:E15008-E15008(2010) [PubMed: 21124846] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Crl:CD EMBL ABX10438.1.
[2]	"Genome sequence of the Brown Norway rat yields insights into mammalian evolution." Rat Genome Sequencing Project Consortium Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M. , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S. Nature 428:493-521(2004) [PubMed: 15057822] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Brown Norway Ensembl ENSRNOP00000019392.
[3]	"Gene and alternative splicing annotation with AIR." Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M., Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z., Istrail S., Li P., Sutton G. Genome Res. 15:54-66(2005) [PubMed: 15632090] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: BN EMBL EDL79903.1.
[4]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Brown Norway Ensembl ENSRNOP00000019392.
[5]	Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M., Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L., Lu F. , Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F. Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: BN EMBL EDL79903.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	EF688602 mRNA. Translation: ABX10438.1. CH473949 Genomic DNA. Translation: EDL79903.1.
IPI	IPI00955631.
RefSeq	NP_001166908.1. NM_001173437.1.
UniGene	Rn.23367.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSRNOT00000019392; ENSRNOP00000019392; ENSRNOG00000014387.
GeneID	362196.
KEGG	rno:362196.
Organism-specific databases
CTD	79094.
RGD	1307153. Chac1.
Phylogenomic databases
eggNOG	roNOG13543.
GeneTree	ENSGT00390000003855.
HOVERGEN	HBG056733.
OMA	GDPQALW.
OrthoDB	EOG40CHJ2.
PhylomeDB	B3STU3.
Gene expression databases
Genevestigator	B3STU3.
Family and domain databases
InterPro	IPR013024. Butirosin_synth_BtrG-like. IPR006840. ChaC. [Graphical view]
Gene3D	G3DSA:3.10.490.10. Butirosin_synth_BtrG-like. 1 hit.
KO	K07232.
PANTHER	PTHR12192. ChaC. 1 hit.
Pfam	PF04752. ChaC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3STU3_RAT

Accession

Primary (citable) accession number: B3STU3

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	November 16, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)