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B3STT8 (B3STT8_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Neuroprotective protein 2 EMBL ABX10433.1
Gene names
Name:Arl4d RGD 1306875
Synonyms:Arf4l RGD 1306875
OrganismRattus norvegicus (Rat) EMBL ABX10433.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length201 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the small GTPase superfamily. Arf family. RuleBase RU003925

Ontologies

Keywords
   LigandGTP-binding RuleBase RU003312 SAAS SAAS006689
Nucleotide-binding
Gene Ontology (GO)
   Biological_processsmall GTPase mediated signal transduction

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintracellular

Inferred from electronic annotation. Source: InterPro

   Molecular_functionGTP binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B3STT8 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: A79A2A22B3AE753D

FASTA20122,228
        10         20         30         40         50         60 
MGNHLTEMAP TASSFLPHFQ ALHVVVIGLD SAGKTSLLYR LKFKEFVQSV PTKGFNTEKI 

        70         80         90        100        110        120 
RVPLGGSRGI TFQVWDVGGQ EKLRPLWRSY TRRTDGLVFV VDSAETERLE EARMELHRIS 

       130        140        150        160        170        180 
KASDNQGVPV LVLANKQDQP GALSAAEVEK RLAVRELAAA TLTHVQGCSA VGGLGLQLGL 

       190        200 
EHLYEMILKR KKAPRSSKKR R

« Hide

References

[1]"Functional identification of neuroprotective molecules."
Dai C., Liang D., Li H., Sasaki M., Dawson T.M., Dawson V.L.
PLoS ONE 5:E15008-E15008(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Crl:CD EMBL ABX10433.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		EF688597 mRNA. Translation: ABX10433.1.
IPIIPI00202984.
UniGeneRn.98418.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCRGD:1306875. rat.

Organism-specific databases

RGD1306875. Arl4d.

Phylogenomic databases

HOVERGENHBG002073.

Gene expression databases

GenevestigatorB3STT8.

Family and domain databases

InterProIPR005225. Small_GTP-bd_dom.
IPR024156. Small_GTPase_ARF.
IPR006689. Small_GTPase_ARF/SAR.
[Graphical view]
PfamPF00025. Arf. 1 hit.
[Graphical view]
PRINTSPR00328. SAR1GTPBP.
SMARTSM00177. ARF. 1 hit.
[Graphical view]
TIGRFAMsTIGR00231. small_GTP. 1 hit.
PROSITEPS51417. ARF. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35565086.

Entry information

Entry nameB3STT8_RAT
AccessionPrimary (citable) accession number: B3STT8
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: April 3, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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