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Protein

Non-structural protein 6

Gene
N/A
Organism
Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4]) (RV-A) (Rotavirus A (strain DS1))
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Non-structural protein 6UniRule annotation
Short name:
NSP6UniRule annotation
OrganismiRotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4]) (RV-A) (Rotavirus A (strain DS1))
Taxonomic identifieri10950 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirusRotavirus A
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi

Subcellular locationi

  • Host cytoplasm UniRule annotation
  • Host mitochondrion UniRule annotation
  • Note: Found in spherical cytoplasmic structures, called viral factories, that appear early after infection and are the site of viral replication and packaging.UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Host cytoplasm, Host mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003695231 – 92Non-structural protein 6Add BLAST92

Interactioni

Subunit structurei

Interacts with NSP2 and NSP5.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the rotavirus A NSP6 family.UniRule annotation

Phylogenomic databases

OrthoDBiVOG090001DO

Family and domain databases

HAMAPiMF_04093 ROTA_NSP6, 1 hit
InterProiView protein in InterPro
IPR006950 Rotavirus_NSP6
PfamiView protein in Pfam
PF04866 Rota_NS6, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD008065 Rota_NS6, 1 hit

Sequencei

Sequence statusi: Complete.

B3SRT4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRLQQRQLF LENLLVGVNS TFHQMQKLSI NTCCQNLQKI LDLLILHRTI
60 70 80 90
HSPAFRLDRM QLRQMQMLAC LWIHQRNHDH LATLDTIKWI SP
Length:92
Mass (Da):11,014
Last modified:September 2, 2008 - v1
Checksum:i33748C9C39421F9E
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti30I → E (PubMed:2152809).1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M33608 Genomic RNA Translation: AAA47327.1
EF672583 Genomic RNA Translation: ABV53259.1

Similar proteinsi

Entry informationi

Entry nameiNSP6_ROTHD
AccessioniPrimary (citable) accession number: B3SRT4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: September 2, 2008
Last modified: May 23, 2018
This is version 24 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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