B3SBI2 (B3SBI2_TRIAD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EDV19898.1

Gene names

ORF Names:

TRIADDRAFT_61626 EMBL EDV19898.1

Organism

Trichoplax adhaerens (Trichoplax reptans) [Reference proteome]

Taxonomic identifier

10228 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Placozoa › Trichoplax

Protein attributes

Sequence length	619 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	double-strand break repair via nonhomologous end joining Inferred from electronic annotation. Source: InterPro telomere maintenance Inferred from electronic annotation. Source: InterPro
Cellular_component	Ku70:Ku80 complex Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP-dependent DNA helicase activity Inferred from electronic annotation. Source: InterPro damaged DNA binding Inferred from electronic annotation. Source: InterPro telomeric DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3SBI2 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 07CCBF14F218BCE8	FASTA	619	69,476
	10 20 30 40 50 60 MTTFSEGSAW MWGGSDMFTA EEEDGQDVAA DQEIRWANKD SLIMLIDCSM PMFRLSGGND 70 80 90 100 110 120 LTPFQLSIKC TRSVLMNKIV SSDKDLVGIV FFGTDKSGNP SDFKHIHVLQ ELDSPDAQRI 130 140 150 160 170 180 LELDTMLADE DGTDFVENYG HNDDFSMNDA LWTCSHMFSN SQQKIGHKRI MLFTNNDDPH 190 200 210 220 230 240 EGNLSLKRLA QTKAKDLNDI GIEIELMHIQ SANNIFDITK FYQDIITIPE DEDVGAVPDA 250 260 270 280 290 300 SGKFDELLIR VRAKDHKKRS LMKIPLNLGQ DLEVGVTIFS LCRPTSRPSY VQLDSKTNQV 310 320 330 340 350 360 VKTVTKHICE DTGSELMAAD IKYYQTFGGE RVIFEKEEVG EIKNFGKNGL TLMGFKPKNC 370 380 390 400 410 420 VKRHYHVRPS YFIYPDESVI SGSTRLVSAL LERTLARDVV AICKFVPRFA SGPKFVALVP 430 440 450 460 470 480 QKEVLDEHKV QVVPPGFNVV FLPYAEDFRQ LKYEETPAPM NEQVDKAKDI VKSLTFQYNP 490 500 510 520 530 540 DKFENPALQK HYSNLEALAL DRDVPEEFID YTEPDAENID KRAGHHINDF IELTFPEGYD 550 560 570 580 590 600 ASAGLKGATK RKTTSATGGT AKKVKQETSE IDVKEYAQKG LLSKLTVNDL KAFCKTADIK 610 CQGKKADLVA AVAAHFNVN

References

[1]

"The Trichoplax genome and the nature of placozoans." Srivastava M., Begovic E., Chapman J., Putnam N.H., Hellsten U., Kawashima T., Kuo A., Mitros T., Salamov A., Carpenter M.L., Signorovitch A.Y., Moreno M.A., Kamm K., Grimwood J., Schmutz J., Shapiro H., Grigoriev I.V., Buss L.W. , Schierwater B., Dellaporta S.L., Rokhsar D.S. Nature 454:955-960(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Grell-BS-1999 EMBL EDV19898.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS985265 Genomic DNA. Translation: EDV19898.1.
RefSeq	XP_002117640.1. XM_002117604.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	10228.JGI61626.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	TriadT61626; TriadP61626; TriadG61626.
GeneID	6758813.
KEGG	tad:TRIADDRAFT_61626.
Phylogenomic databases
eggNOG	NOG305318.
HOGENOM	HOG000006588.
KO	K10884.
OMA	RTFNVNT.
Family and domain databases
Gene3D	1.10.1600.10. 1 hit. 1.10.720.30. 1 hit. 2.40.290.10. 1 hit.
InterPro	IPR006165. Ku70. IPR006164. Ku70/Ku80_beta-barrel_dom. IPR005160. Ku_C. IPR005161. Ku_N. IPR003034. SAP_dom. IPR016194. SPOC_like_C_dom. IPR002035. VWF_A. [Graphical view]
PANTHER	PTHR12604:SF2. PTHR12604:SF2. 1 hit.
Pfam	PF02735. Ku. 1 hit. PF03730. Ku_C. 1 hit. PF03731. Ku_N. 1 hit. PF02037. SAP. 1 hit. [Graphical view]
PIRSF	PIRSF003033. Ku70. 1 hit.
SMART	SM00559. Ku78. 1 hit. SM00513. SAP. 1 hit. SM00327. VWA. 1 hit. [Graphical view]
SUPFAM	SSF100939. SPOC-like. 1 hit.
TIGRFAMs	TIGR00578. ku70. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3SBI2_TRIAD

Accession

Primary (citable) accession number: B3SBI2

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)