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B3RZT0

- B3RZT0_TRIAD

UniProt

B3RZT0 - B3RZT0_TRIAD

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Protein
DNA ligase
Gene
TRIADDRAFT_57566
Organism
Trichoplax adhaerens (Trichoplax reptans)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC
  4. zinc ion binding Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:TRIADDRAFT_57566Imported
OrganismiTrichoplax adhaerens (Trichoplax reptans)
Taxonomic identifieri10228 [NCBI]
Taxonomic lineageiEukaryotaMetazoaPlacozoaTrichoplax
ProteomesiUP000009022: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi10228.JGI57566.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000007653.
KOiK10776.
OMAiLFSEMKH.
OrthoDBiEOG7BKCT2.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.30.1740.10. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
IPR019406. Znf_C2H2_APLF-like.
IPR001510. Znf_PARP.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
PF10283. zf-CCHH. 1 hit.
PF00645. zf-PARP. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
PS50064. PARP_ZN_FINGER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3RZT0-1 [UniParc]FASTAAdd to Basket

« Hide

MPIEFLAEYD RSGRASCKGC KQKLEKKALR IAKVVENPFG DTGETMKQWH    50
HPKCIFNSFI RARPATKIIQ TVADIDGYDD LEDDDQESVS QMITDCLKER 100
GNKQSKKKMV QQSIPFAKAY HSSTSNNNNS QDDNSFQLFT SLCDKIGNVG 150
SYLAKTKVVA DLLKMGSNGN GYEGDIYLLM KLLLPGIEKR VYNLQSRQLI 200
KLFSQIFVCD YDEMLEDLDK GDVAETITDF FANNTAVAPL NRSLLTMQEV 250
DDLLDELSNV TKEDMQLKVL KKIARRCTTE DLRYIIRLIK HDLRINAGSR 300
HILDALDKNA HAAYQASSDL RDVVDRCLAR KTDRNNDDDD GAPKLKRDLS 350
IRASLMTPVR PMLAEACKSI NTAIKKCPKG MFAEIKYDGE RVQIHKNGQQ 400
FEYYSRSLKQ VMPHKVKDIK QYLPQACPHG NSIILDSEVL LVDKTGKPLP 450
FGTLGVHKKQ NFSDATVCLF IFDCLHFNGK DLMQTRKILE SNVQEIPGRI 500
MLSEKKLVQK ENELTGLVSR VIREGLEGLV LKDVESVYEP GKRHWLKIKK 550
DYLAEGSMAD SADLVVLGAY YGTGNKGGVM SVFLMGTYDE RSGRWRTVAK 600
CGNGHDDKTL DKINKELSVV KISKDFSKVP GWLNVHRSLV PDFIVTDPKT 650
APVWEITGAE FSQSTVHTAD GISIRFPRVT RIRDDKDWTN ATNLDRLKTL 700
YENSKDASDI ADSLLGVKKE VDDEGECSSS SSPDKTVTRK RKVEELEKEK 750
TTIADNKVIS KIPCKYGPNC YRKNGEHLAN YSHNKENGNS SPNACGSQIK 800
QDDSSKYMTA SEFWDFYKKS KQS 823
Length:823
Mass (Da):92,832
Last modified:September 2, 2008 - v1
Checksum:i9D9CAEB850C94A94
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS985246 Genomic DNA. Translation: EDV23892.1.
RefSeqiXP_002113418.1. XM_002113382.1.

Genome annotation databases

EnsemblMetazoaiTriadT57566; TriadP57566; TriadG57566.
GeneIDi6754999.
KEGGitad:TRIADDRAFT_57566.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS985246 Genomic DNA. Translation: EDV23892.1 .
RefSeqi XP_002113418.1. XM_002113382.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10228.JGI57566.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai TriadT57566 ; TriadP57566 ; TriadG57566 .
GeneIDi 6754999.
KEGGi tad:TRIADDRAFT_57566.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000007653.
KOi K10776.
OMAi LFSEMKH.
OrthoDBi EOG7BKCT2.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.30.1740.10. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
IPR019406. Znf_C2H2_APLF-like.
IPR001510. Znf_PARP.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
PF10283. zf-CCHH. 1 hit.
PF00645. zf-PARP. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
PS50064. PARP_ZN_FINGER_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Grell-BS-1999Imported.

Entry informationi

Entry nameiB3RZT0_TRIAD
AccessioniPrimary (citable) accession number: B3RZT0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: November 13, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3