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B3RZT0

- B3RZT0_TRIAD

UniProt

B3RZT0 - B3RZT0_TRIAD

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Protein

DNA ligase

Gene

TRIADDRAFT_57566

Organism
Trichoplax adhaerens (Trichoplax reptans)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC
  4. zinc ion binding Source: InterPro

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:TRIADDRAFT_57566Imported
OrganismiTrichoplax adhaerens (Trichoplax reptans)Imported
Taxonomic identifieri10228 [NCBI]
Taxonomic lineageiEukaryotaMetazoaPlacozoaTrichoplax
ProteomesiUP000009022: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi10228.JGI57566.

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000007653.
InParanoidiB3RZT0.
KOiK10776.
OMAiLFSEMKH.
OrthoDBiEOG7BKCT2.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.30.1740.10. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
IPR019406. Znf_C2H2_APLF-like.
IPR001510. Znf_PARP.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
PF10283. zf-CCHH. 1 hit.
PF00645. zf-PARP. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
PS50064. PARP_ZN_FINGER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3RZT0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPIEFLAEYD RSGRASCKGC KQKLEKKALR IAKVVENPFG DTGETMKQWH
60 70 80 90 100
HPKCIFNSFI RARPATKIIQ TVADIDGYDD LEDDDQESVS QMITDCLKER
110 120 130 140 150
GNKQSKKKMV QQSIPFAKAY HSSTSNNNNS QDDNSFQLFT SLCDKIGNVG
160 170 180 190 200
SYLAKTKVVA DLLKMGSNGN GYEGDIYLLM KLLLPGIEKR VYNLQSRQLI
210 220 230 240 250
KLFSQIFVCD YDEMLEDLDK GDVAETITDF FANNTAVAPL NRSLLTMQEV
260 270 280 290 300
DDLLDELSNV TKEDMQLKVL KKIARRCTTE DLRYIIRLIK HDLRINAGSR
310 320 330 340 350
HILDALDKNA HAAYQASSDL RDVVDRCLAR KTDRNNDDDD GAPKLKRDLS
360 370 380 390 400
IRASLMTPVR PMLAEACKSI NTAIKKCPKG MFAEIKYDGE RVQIHKNGQQ
410 420 430 440 450
FEYYSRSLKQ VMPHKVKDIK QYLPQACPHG NSIILDSEVL LVDKTGKPLP
460 470 480 490 500
FGTLGVHKKQ NFSDATVCLF IFDCLHFNGK DLMQTRKILE SNVQEIPGRI
510 520 530 540 550
MLSEKKLVQK ENELTGLVSR VIREGLEGLV LKDVESVYEP GKRHWLKIKK
560 570 580 590 600
DYLAEGSMAD SADLVVLGAY YGTGNKGGVM SVFLMGTYDE RSGRWRTVAK
610 620 630 640 650
CGNGHDDKTL DKINKELSVV KISKDFSKVP GWLNVHRSLV PDFIVTDPKT
660 670 680 690 700
APVWEITGAE FSQSTVHTAD GISIRFPRVT RIRDDKDWTN ATNLDRLKTL
710 720 730 740 750
YENSKDASDI ADSLLGVKKE VDDEGECSSS SSPDKTVTRK RKVEELEKEK
760 770 780 790 800
TTIADNKVIS KIPCKYGPNC YRKNGEHLAN YSHNKENGNS SPNACGSQIK
810 820
QDDSSKYMTA SEFWDFYKKS KQS
Length:823
Mass (Da):92,832
Last modified:September 2, 2008 - v1
Checksum:i9D9CAEB850C94A94
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS985246 Genomic DNA. Translation: EDV23892.1.
RefSeqiXP_002113418.1. XM_002113382.1.

Genome annotation databases

EnsemblMetazoaiTriadT57566; TriadP57566; TriadG57566.
GeneIDi6754999.
KEGGitad:TRIADDRAFT_57566.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS985246 Genomic DNA. Translation: EDV23892.1 .
RefSeqi XP_002113418.1. XM_002113382.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10228.JGI57566.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai TriadT57566 ; TriadP57566 ; TriadG57566 .
GeneIDi 6754999.
KEGGi tad:TRIADDRAFT_57566.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000007653.
InParanoidi B3RZT0.
KOi K10776.
OMAi LFSEMKH.
OrthoDBi EOG7BKCT2.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.30.1740.10. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
IPR019406. Znf_C2H2_APLF-like.
IPR001510. Znf_PARP.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
PF10283. zf-CCHH. 1 hit.
PF00645. zf-PARP. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
PS50064. PARP_ZN_FINGER_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Grell-BS-1999Imported.

Entry informationi

Entry nameiB3RZT0_TRIAD
AccessioniPrimary (citable) accession number: B3RZT0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: October 29, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3