Putative uncharacterized protein - Trichoplax adhaerens

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B3RP59 (B3RP59_TRIAD) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 27. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EDV27575.1

Gene names

ORF Names:

TRIADDRAFT_20832 EMBL EDV27575.1

Organism

Trichoplax adhaerens (Trichoplax reptans) [Complete proteome]

Taxonomic identifier

10228 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Placozoa › Trichoplax

Protein attributes

Sequence length	612 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tRNA aminoacylation for protein translation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro aminoacyl-tRNA ligase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Experimental info

Non-terminal residue

EMBL EDV27575.1

Sequences

Sequence

Length

Mass (Da)

Tools

B3RP59 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: E16D2B2AED89FCD9
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FASTA

612

69,150

        10         20         30         40         50         60 
TAKYCSRSHT CGQLRKEDAG QEVKLYGWVR HIRRFVNGPF FLTLHDAYGS TQLFVKKTSP 

        70         80         90        100        110        120 
VYNILEKLSV ESVIGITGTV NARPENMINK DMPTGEIEVV VDNVNIVNQA EELPIQVSDK 

       130        140        150        160        170        180 
GYKAKDELKL QYRYVDLRSS NLQQNLRLRS NIVMAMRKFL IDRAGFAEVE TPTLFKRTPE 

       190        200        210        220        230        240 
GAREFLVPTR QPELFYTLVQ SPQQFKQLLM VGGLDRYFQF ARCYRDEDSR ADRQPEFTQL 

       250        260        270        280        290        300 
DLEMSFVNQY DIQSLIEDMI HDIWPITGHK LSTPIPFPRM SFADAVTKYG SDKPDVRFDM 

       310        320        330        340        350        360 
KIHDITEAVG YLFDVDSSSK ATVKASMIVI PGGENKELNQ IHDFVDKNDT GKITMLRIRE 

       370        380        390        400        410        420 
DGSWKGNISS DFQLKLKSQL QNEKAIKPGD LVILSAGVNY KPNLLLGKLR LFCADLLEAK 

       430        440        450        460        470        480 
GIQLRDPNEF KFLWVEDFPL FTLNDESDSM IESTHHPFTA PVAEDVNILF TDPLKVSSAI 

       490        500        510        520        530        540 
YLCTHNVILI ASLSVLGQHY DLVLNGNEVG GGSIRVHDFN LQTQIFEKIL KVNASQFKHL 

       550        560        570        580        590        600 
LKGLKSGCPP HGGIALGFDR FMAVLCNSSS LRDVIAFPKS ASGKDLLTEA PSTVSNEYLS 

       610 
EYHIRSLSLK TD

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References

[1]

"The Trichoplax genome and the nature of placozoans."
Srivastava M., Begovic E., Chapman J., Putnam N.H., Hellsten U., Kawashima T., Kuo A., Mitros T., Salamov A., Carpenter M.L., Signorovitch A.Y., Moreno M.A., Kamm K., Grimwood J., Schmutz J., Shapiro H., Grigoriev I.V., Buss L.W.

Rokhsar D.S.
Nature 454:955-960(2008) [PubMed: 18719581] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Grell-BS-1999 EMBL EDV27575.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS985242 Genomic DNA. Translation: EDV27575.1.
RefSeq	XP_002109409.1. XM_002109373.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B3RP59.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	TriadT20832; TriadP20832; TriadG20832.
GeneID	6751185.
KEGG	tad:TRIADDRAFT_20832.
Phylogenomic databases
OMA	LHFLWVV.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004524. Asp-tRNA-synth_IIb_bac/mt. IPR002312. Asp/Asn-tRNA-synth_IIb. IPR004115. GAD_dom. IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR004365. NA-bd_OB_tRNA-helicase. [Graphical view]
Gene3D	G3DSA:3.30.1360.30. GAD_dom. 1 hit. G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K01876.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF5. AspS_bac. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
PRINTS	PR01042. TRNASYNTHASP.
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit. SSF55261. SSF55261. 1 hit.
TIGRFAMs	TIGR00459. AspS_bact. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3RP59_TRIAD

Accession

Primary (citable) accession number: B3RP59

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	January 25, 2012
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Experimental info

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry information