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B3RCS2

- B3RCS2_CUPTR

UniProt

B3RCS2 - B3RCS2_CUPTR

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

RALTA_B2120

Organism
Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCTAI164546:GJNE-5297-MONOMER.
CTAI977880:GLC7-5297-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:RALTA_B2120Imported
OrganismiCupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424))Imported
Taxonomic identifieri164546 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
ProteomesiUP000001692: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi164546.RALTA_B2120.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiSACDMAL.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3RCS2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAKTTTQDSR ARRAAAKGSA KPAAKRSGSA RPAARGAAPA EGTTAPLEKY
60 70 80 90 100
RRMRDFGATP EPSGGTARAT PRKRAAALSF VIQKHAARRL HYDFRLELGG
110 120 130 140 150
TLKSWAVPKG PSLDPSDKRM AVHVEDHPLD YASFEGVIPA GHYGAGTVIV
160 170 180 190 200
WDRGTWVPVG DPEAGYRSGK LKFELRGEKL HGHWTLVRMH GSRQKEQDAW
210 220 230 240 250
LLIKERDDAA VPASDFDVVE ALPDSVLGGT QRKAAAKRAS AGKAATATAA
260 270 280 290 300
AEAATPAAHE AIRALKPPPG ATRAALPLTL APQLATLVEK PPPDAAAWRY
310 320 330 340 350
EIKFDGYRLL ARVDGKDVRL FTRQGHDWTS KLRALARDIG ALGLPDGWID
360 370 380 390 400
GEIVVLGKHG QTDFQALQNA FDTSRVEAIQ YFAFDLPYFA GHDLRKVPLV
410 420 430 440 450
ERRALLRRIF GHNASPRLQF SEDFEASAGD MLDAACRMKL EGVIGKRADS
460 470 480 490 500
AYVSARSNTW IKLKCTLRQE FVVAGFTDPK GSRNGIGSLL LGVHDTGGRL
510 520 530 540 550
RYAGNVGTGF DTRTLDELRA QLDALRADEA PFHTVPAGVR GHWVKPRLVA
560 570 580 590 600
EVSFGNWTRE GRVRHAVFHG LRTDKPAAAV SVEQPSVPAG KGKAAATTRG
610 620 630 640 650
KPASTPASRS KPGAARRPTA VGGKVSISHA ERVIDAESGL TKGELVRYYE
660 670 680 690 700
RAAALMLPHL RGRPIAMVRA PSGVGGEQFF QRHSDTLRVD GLNVLDPGLW
710 720 730 740 750
PGHPALLEIT SAEALVAAAQ LNVVEFHTWN ASKRSIDRPN RIIFDLDPGE
760 770 780 790 800
GVPWAQVQEA AAMMKALLDE LGLASFLKTS GGKGLHVVVP VTPRAGWDEV
810 820 830 840 850
KDFARDVVLH VAATLPQRFV AKSGARNRVG KIFIDYLRNG MGATTVAAFS
860 870 880 890 900
ARARPGLGVS IPVAWEELEA LTSATHWTVA NVEARLDALE AADPWADYAG
910
TRQAITRAAG RLARAA
Length:916
Mass (Da):98,634
Last modified:September 2, 2008 - v1
Checksum:i0DFED22347E268F7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU633750 Genomic DNA. Translation: CAQ72697.1.
RefSeqiYP_002008749.1. NC_010530.1.

Genome annotation databases

EnsemblBacteriaiCAQ72697; CAQ72697; RALTA_B2120.
GeneIDi6456443.
KEGGicti:RALTA_B2120.
PATRICi21537905. VBICupTai42494_5560.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU633750 Genomic DNA. Translation: CAQ72697.1 .
RefSeqi YP_002008749.1. NC_010530.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 164546.RALTA_B2120.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAQ72697 ; CAQ72697 ; RALTA_B2120 .
GeneIDi 6456443.
KEGGi cti:RALTA_B2120.
PATRICi 21537905. VBICupTai42494_5560.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi SACDMAL.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci CTAI164546:GJNE-5297-MONOMER.
CTAI977880:GLC7-5297-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: R1 / LMG 19424Imported.

Entry informationi

Entry nameiB3RCS2_CUPTR
AccessioniPrimary (citable) accession number: B3RCS2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: October 1, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3