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B3RCS2

- B3RCS2_CUPTR

UniProt

B3RCS2 - B3RCS2_CUPTR

Protein
Submitted name:

ATP dependent DNA ligase

Gene

RALTA_B2120

Organism
Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (02 Sep 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciCTAI164546:GJNE-5297-MONOMER.
    CTAI977880:GLC7-5297-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:RALTA_B2120Imported
    OrganismiCupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424))Imported
    Taxonomic identifieri164546 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
    ProteomesiUP000001692: Chromosome 2

    Interactioni

    Protein-protein interaction databases

    STRINGi164546.RALTA_B2120.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiSACDMAL.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B3RCS2-1 [UniParc]FASTAAdd to Basket

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    MAKTTTQDSR ARRAAAKGSA KPAAKRSGSA RPAARGAAPA EGTTAPLEKY    50
    RRMRDFGATP EPSGGTARAT PRKRAAALSF VIQKHAARRL HYDFRLELGG 100
    TLKSWAVPKG PSLDPSDKRM AVHVEDHPLD YASFEGVIPA GHYGAGTVIV 150
    WDRGTWVPVG DPEAGYRSGK LKFELRGEKL HGHWTLVRMH GSRQKEQDAW 200
    LLIKERDDAA VPASDFDVVE ALPDSVLGGT QRKAAAKRAS AGKAATATAA 250
    AEAATPAAHE AIRALKPPPG ATRAALPLTL APQLATLVEK PPPDAAAWRY 300
    EIKFDGYRLL ARVDGKDVRL FTRQGHDWTS KLRALARDIG ALGLPDGWID 350
    GEIVVLGKHG QTDFQALQNA FDTSRVEAIQ YFAFDLPYFA GHDLRKVPLV 400
    ERRALLRRIF GHNASPRLQF SEDFEASAGD MLDAACRMKL EGVIGKRADS 450
    AYVSARSNTW IKLKCTLRQE FVVAGFTDPK GSRNGIGSLL LGVHDTGGRL 500
    RYAGNVGTGF DTRTLDELRA QLDALRADEA PFHTVPAGVR GHWVKPRLVA 550
    EVSFGNWTRE GRVRHAVFHG LRTDKPAAAV SVEQPSVPAG KGKAAATTRG 600
    KPASTPASRS KPGAARRPTA VGGKVSISHA ERVIDAESGL TKGELVRYYE 650
    RAAALMLPHL RGRPIAMVRA PSGVGGEQFF QRHSDTLRVD GLNVLDPGLW 700
    PGHPALLEIT SAEALVAAAQ LNVVEFHTWN ASKRSIDRPN RIIFDLDPGE 750
    GVPWAQVQEA AAMMKALLDE LGLASFLKTS GGKGLHVVVP VTPRAGWDEV 800
    KDFARDVVLH VAATLPQRFV AKSGARNRVG KIFIDYLRNG MGATTVAAFS 850
    ARARPGLGVS IPVAWEELEA LTSATHWTVA NVEARLDALE AADPWADYAG 900
    TRQAITRAAG RLARAA 916
    Length:916
    Mass (Da):98,634
    Last modified:September 2, 2008 - v1
    Checksum:i0DFED22347E268F7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU633750 Genomic DNA. Translation: CAQ72697.1.
    RefSeqiYP_002008749.1. NC_010530.1.

    Genome annotation databases

    EnsemblBacteriaiCAQ72697; CAQ72697; RALTA_B2120.
    GeneIDi6456443.
    KEGGicti:RALTA_B2120.
    PATRICi21537905. VBICupTai42494_5560.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU633750 Genomic DNA. Translation: CAQ72697.1 .
    RefSeqi YP_002008749.1. NC_010530.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 164546.RALTA_B2120.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAQ72697 ; CAQ72697 ; RALTA_B2120 .
    GeneIDi 6456443.
    KEGGi cti:RALTA_B2120.
    PATRICi 21537905. VBICupTai42494_5560.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi SACDMAL.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci CTAI164546:GJNE-5297-MONOMER.
    CTAI977880:GLC7-5297-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: R1 / LMG 19424Imported.

    Entry informationi

    Entry nameiB3RCS2_CUPTR
    AccessioniPrimary (citable) accession number: B3RCS2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 2, 2008
    Last sequence update: September 2, 2008
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3