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Protein
Submitted name:

ATP dependent DNA ligase

Gene

RALTA_B2120

Organism
Cupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CIP 107171 / LMG 19424 / R1) (Ralstonia taiwanensis (strain LMG 19424))
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciCTAI977880:G1GJV-5182-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:RALTA_B2120Imported
OrganismiCupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CIP 107171 / LMG 19424 / R1) (Ralstonia taiwanensis (strain LMG 19424))Imported
Taxonomic identifieri977880 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
Proteomesi
  • UP000001692 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi977880.RALTA_B2120

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini381 – 478DNA_LIGASE_A3InterPro annotationAdd BLAST98

Phylogenomic databases

eggNOGiENOG4105DQE Bacteria
COG1793 LUCA
COG3285 LUCA
HOGENOMiHOG000222509
KOiK01971
OMAiAMMVEDH

Family and domain databases

CDDicd04862 PaeLigD_Pol_like, 1 hit
InterProiView protein in InterPro
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR014146 LigD_ligase_dom
IPR014144 LigD_PE_domain
IPR014145 LigD_pol_dom
IPR012340 NA-bd_OB-fold
IPR014143 NHEJ_ligase_prk
IPR033651 PaeLigD_Pol-like
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF13298 LigD_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR02777 LigD_PE_dom, 1 hit
TIGR02778 ligD_pol, 1 hit
TIGR02779 NHEJ_ligase_lig, 1 hit
TIGR02776 NHEJ_ligase_prk, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

B3RCS2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKTTTQDSR ARRAAAKGSA KPAAKRSGSA RPAARGAAPA EGTTAPLEKY
60 70 80 90 100
RRMRDFGATP EPSGGTARAT PRKRAAALSF VIQKHAARRL HYDFRLELGG
110 120 130 140 150
TLKSWAVPKG PSLDPSDKRM AVHVEDHPLD YASFEGVIPA GHYGAGTVIV
160 170 180 190 200
WDRGTWVPVG DPEAGYRSGK LKFELRGEKL HGHWTLVRMH GSRQKEQDAW
210 220 230 240 250
LLIKERDDAA VPASDFDVVE ALPDSVLGGT QRKAAAKRAS AGKAATATAA
260 270 280 290 300
AEAATPAAHE AIRALKPPPG ATRAALPLTL APQLATLVEK PPPDAAAWRY
310 320 330 340 350
EIKFDGYRLL ARVDGKDVRL FTRQGHDWTS KLRALARDIG ALGLPDGWID
360 370 380 390 400
GEIVVLGKHG QTDFQALQNA FDTSRVEAIQ YFAFDLPYFA GHDLRKVPLV
410 420 430 440 450
ERRALLRRIF GHNASPRLQF SEDFEASAGD MLDAACRMKL EGVIGKRADS
460 470 480 490 500
AYVSARSNTW IKLKCTLRQE FVVAGFTDPK GSRNGIGSLL LGVHDTGGRL
510 520 530 540 550
RYAGNVGTGF DTRTLDELRA QLDALRADEA PFHTVPAGVR GHWVKPRLVA
560 570 580 590 600
EVSFGNWTRE GRVRHAVFHG LRTDKPAAAV SVEQPSVPAG KGKAAATTRG
610 620 630 640 650
KPASTPASRS KPGAARRPTA VGGKVSISHA ERVIDAESGL TKGELVRYYE
660 670 680 690 700
RAAALMLPHL RGRPIAMVRA PSGVGGEQFF QRHSDTLRVD GLNVLDPGLW
710 720 730 740 750
PGHPALLEIT SAEALVAAAQ LNVVEFHTWN ASKRSIDRPN RIIFDLDPGE
760 770 780 790 800
GVPWAQVQEA AAMMKALLDE LGLASFLKTS GGKGLHVVVP VTPRAGWDEV
810 820 830 840 850
KDFARDVVLH VAATLPQRFV AKSGARNRVG KIFIDYLRNG MGATTVAAFS
860 870 880 890 900
ARARPGLGVS IPVAWEELEA LTSATHWTVA NVEARLDALE AADPWADYAG
910
TRQAITRAAG RLARAA
Length:916
Mass (Da):98,634
Last modified:September 2, 2008 - v1
Checksum:i0DFED22347E268F7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU633750 Genomic DNA Translation: CAQ72697.1
RefSeqiWP_012356910.1, NC_010530.1

Genome annotation databases

EnsemblBacteriaiCAQ72697; CAQ72697; RALTA_B2120
GeneIDi29763817
KEGGicti:RALTA_B2120

Similar proteinsi

Entry informationi

Entry nameiB3RCS2_CUPTR
AccessioniPrimary (citable) accession number: B3RCS2
Entry historyiIntegrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: April 25, 2018
This is version 61 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health