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B3RCS2

- B3RCS2_CUPTR

UniProt

B3RCS2 - B3RCS2_CUPTR

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Protein
Submitted name: ATP dependent DNA ligase
Gene
RALTA_B2120
Organism
Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424))
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCTAI164546:GJNE-5297-MONOMER.
CTAI977880:GLC7-5297-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:RALTA_B2120Imported
OrganismiCupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424))Imported
Taxonomic identifieri164546 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
ProteomesiUP000001692: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi164546.RALTA_B2120.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiSACDMAL.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3RCS2-1 [UniParc]FASTAAdd to Basket

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MAKTTTQDSR ARRAAAKGSA KPAAKRSGSA RPAARGAAPA EGTTAPLEKY    50
RRMRDFGATP EPSGGTARAT PRKRAAALSF VIQKHAARRL HYDFRLELGG 100
TLKSWAVPKG PSLDPSDKRM AVHVEDHPLD YASFEGVIPA GHYGAGTVIV 150
WDRGTWVPVG DPEAGYRSGK LKFELRGEKL HGHWTLVRMH GSRQKEQDAW 200
LLIKERDDAA VPASDFDVVE ALPDSVLGGT QRKAAAKRAS AGKAATATAA 250
AEAATPAAHE AIRALKPPPG ATRAALPLTL APQLATLVEK PPPDAAAWRY 300
EIKFDGYRLL ARVDGKDVRL FTRQGHDWTS KLRALARDIG ALGLPDGWID 350
GEIVVLGKHG QTDFQALQNA FDTSRVEAIQ YFAFDLPYFA GHDLRKVPLV 400
ERRALLRRIF GHNASPRLQF SEDFEASAGD MLDAACRMKL EGVIGKRADS 450
AYVSARSNTW IKLKCTLRQE FVVAGFTDPK GSRNGIGSLL LGVHDTGGRL 500
RYAGNVGTGF DTRTLDELRA QLDALRADEA PFHTVPAGVR GHWVKPRLVA 550
EVSFGNWTRE GRVRHAVFHG LRTDKPAAAV SVEQPSVPAG KGKAAATTRG 600
KPASTPASRS KPGAARRPTA VGGKVSISHA ERVIDAESGL TKGELVRYYE 650
RAAALMLPHL RGRPIAMVRA PSGVGGEQFF QRHSDTLRVD GLNVLDPGLW 700
PGHPALLEIT SAEALVAAAQ LNVVEFHTWN ASKRSIDRPN RIIFDLDPGE 750
GVPWAQVQEA AAMMKALLDE LGLASFLKTS GGKGLHVVVP VTPRAGWDEV 800
KDFARDVVLH VAATLPQRFV AKSGARNRVG KIFIDYLRNG MGATTVAAFS 850
ARARPGLGVS IPVAWEELEA LTSATHWTVA NVEARLDALE AADPWADYAG 900
TRQAITRAAG RLARAA 916
Length:916
Mass (Da):98,634
Last modified:September 2, 2008 - v1
Checksum:i0DFED22347E268F7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CU633750 Genomic DNA. Translation: CAQ72697.1.
RefSeqiYP_002008749.1. NC_010530.1.

Genome annotation databases

EnsemblBacteriaiCAQ72697; CAQ72697; RALTA_B2120.
GeneIDi6456443.
KEGGicti:RALTA_B2120.
PATRICi21537905. VBICupTai42494_5560.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CU633750 Genomic DNA. Translation: CAQ72697.1 .
RefSeqi YP_002008749.1. NC_010530.1.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 164546.RALTA_B2120.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAQ72697 ; CAQ72697 ; RALTA_B2120 .
GeneIDi 6456443.
KEGGi cti:RALTA_B2120.
PATRICi 21537905. VBICupTai42494_5560.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi SACDMAL.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci CTAI164546:GJNE-5297-MONOMER.
CTAI977880:GLC7-5297-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: R1 / LMG 19424.

Entry informationi

Entry nameiB3RCS2_CUPTR
AccessioniPrimary (citable) accession number: B3RCS2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: May 14, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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