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B3RBZ1 (B3RBZ1_CUPTR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Choline dehydrogenase HAMAP MF_00750
Short name=CDH HAMAP MF_00750
Short name=CHD HAMAP MF_00750
EC=1.1.99.1 HAMAP MF_00750
Gene names
Name:betA1 EMBL CAQ72416.1
Synonyms:betA HAMAP MF_00750
Ordered Locus Names:RALTA_B1832
OrganismCupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424)) [Complete proteome] [HAMAP]
Taxonomic identifier164546 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Cupriavidus

Protein attributes

Sequence length576 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine By similarity. HAMAP MF_00750 SAAS SAAS007867

Catalytic activity

Choline + acceptor = betaine aldehyde + reduced acceptor. HAMAP MF_00750 RuleBase RU003969 SAAS SAAS007867

Cofactor

FAD By similarity. HAMAP MF_00750 SAAS SAAS007867 RuleBase RU003968

Pathway

Amine and polyamine biosynthesis; betaine biosynthesis via choline pathway; betaine aldehyde from choline (cytochrome c reductase route): step 1/1. HAMAP MF_00750 RuleBase RU003969 SAAS SAAS007867

Sequence similarities

Belongs to the GMC oxidoreductase family. HAMAP MF_00750 RuleBase RU003968

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding8 – 3730FAD By similarity HAMAP MF_00750

Sites

Active site4751 By similarity HAMAP MF_00750

Sequences

Sequence LengthMass (Da)Tools
B3RBZ1 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 3C876DC412644082

FASTA57663,519
        10         20         30         40         50         60 
MQAIHEYDYI IVGAGSAGCV LAARLSEDAG VSVLLLEAGG PDWRLDWRTQ MPAALAYPLQ 

        70         80         90        100        110        120 
GTTYNWAYVT EPEPHMNNRR MTQGRGKGLG GSSLINGMCY IRGNAMDYDG WAETRSLENW 

       130        140        150        160        170        180 
SYADCLPYFR KAETYDKGAN DYHGGNGPLH VTTPKAGISP LFDAFIKAGE QAGYGRTDDL 

       190        200        210        220        230        240 
NGFRQEGFGP MDRTTTAGGR RCSTSLAYLD QARERPNLTV HTRALADRIL FAGQRAIGVS 

       250        260        270        280        290        300 
YLQGDHVREA RARREVIVSN GAIASPQLLL RSGVGNADEL RAFGIDPVVD LRGVGENLQD 

       310        320        330        340        350        360 
HLEMYLQYEC TKPVSLYPAL QWWNKPAIGI EWYLRGTGTA ASNHFEAGGF IRSSDEFAWP 

       370        380        390        400        410        420 
NLQYHFIPLA MNYDGSNPVK SHGFQCHVGS MRSPSTGFVK LASRDPRVKP RLLFNYMAHD 

       430        440        450        460        470        480 
VDWREFRAGV RLTREIIGQQ AMDQFRGREI KPGMMVQSDA EIDAFVREHA ETALHPSCTC 

       490        500        510        520        530        540 
KMGDASDPMA VVDNQGRVHG LSGLRVVDAS IMPKIVTGNL NAPTIMMAEK LADVIRGRAP 

       550        560        570 
LQRSTAPYYK ATPARMQTVA ERGQPPAARM PLPMPA

« Hide

References

[1]"Genome sequence of the beta-rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia."
Amadou C., Pascal G., Mangenot S., Glew M., Bontemps C., Capela D., Carrere S., Cruveiller S., Dossat C., Lajus A., Marchetti M., Poinsot V., Rouy Z., Servin B., Saad M., Schenowitz C., Barbe V., Batut J., Medigue C., Masson-Boivin C.
Genome Res. 18:1472-1483(2008) [PubMed: 18490699] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CU633750 Genomic DNA. Translation: CAQ72416.1.
RefSeqYP_002008468.1. NC_010530.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB3RBZ1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6456765.
GenomeReviewsGene locus RALTA_B1832 in contig CU633750_GR.
KEGGcti:RALTA_B1832.
PATRIC21537335. VBICupTai42494_5275.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG734713.
OMARSTAPYY.
ProtClustDBPRK02106.

Family and domain databases

HAMAPMF_00750. Choline_dehydrogen.
[Tree]
InterProIPR011533. Choline_dehydrogenase.
IPR012132. GMC_OxRdtase.
IPR000172. GMC_OxRdtase_N.
IPR007867. GMC_OxRtase_C.
[Graphical view]
KOK00108.
PfamPF05199. GMC_oxred_C. 1 hit.
PF00732. GMC_oxred_N. 1 hit.
[Graphical view]
PIRSFPIRSF000137. Alcohol_oxidase. 1 hit.
TIGRFAMsTIGR01810. BetA. 1 hit.
PROSITEPS00623. GMC_OXRED_1. 1 hit.
PS00624. GMC_OXRED_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3RBZ1_CUPTR
AccessionPrimary (citable) accession number: B3RBZ1
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info