Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

B3RBB4 (B3RBB4_CUPTR) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length557 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B3RBB4 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: AA36D921BFBA5365

FASTA55761,824
        10         20         30         40         50         60 
MKAFADLYAA LDGTTSTKAR LGALVDYLRS APAEDAAWAV YFLAGGKPRQ IVPVSLLRDL 

        70         80         90        100        110        120 
ARQAADLPDW LFEESYQAVG DLAETIALLL PDPRDADHAG LAEWVEQRLL PLRGLPPDAL 

       130        140        150        160        170        180 
MPRLDALWRP LDAHGRLVLF KLITGAFRVG VSRLLVTRAL GEVAGIDPKR VAERMVGYTD 

       190        200        210        220        230        240 
LSARPDAARF LALLAPEDED DRALRAGGQP YPFFLAHPLQ APAEQFDTVL GTPGAWLVEW 

       250        260        270        280        290        300 
KWDGIRAQLV RRGGQTWLWS RGEELITERF PELQQAAATL PDGTVLDGEI VIWQQGRVQP 

       310        320        330        340        350        360 
FALLQQRIGR KTLSARLLRE APAILMAYDL LEWQGEDWRT RPQAERRARL EQVVAAHVHP 

       370        380        390        400        410        420 
ALELSPLVEA DSWERYARLR DASRELGVEG FMLKAAGAAY GAGRTKDVGV WWKWKIDPYS 

       430        440        450        460        470        480 
VDAVLVYAQR GHGRRASLYT DFTFAVWNGP PGTPGRALVP FAKAYSGLTD DEMRAVDAIV 

       490        500        510        520        530        540 
RRTTVEKFGP VRSVEPTQVF ELGFEGIARS GRHKSGIAVR FPRMLRWRTD KPIDEADTLA 

       550 
TLEAMLPATG APREDAA 

« Hide

References

[1]"Genome sequence of the beta-rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia."
Amadou C., Pascal G., Mangenot S., Glew M., Bontemps C., Capela D., Carrere S., Cruveiller S., Dossat C., Lajus A., Marchetti M., Poinsot V., Rouy Z., Servin B., Saad M., Schenowitz C., Barbe V., Batut J., Medigue C., Masson-Boivin C.
Genome Res. 18:1472-1483(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: R1 / LMG 19424.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU633750 Genomic DNA. Translation: CAQ72189.1.
RefSeqYP_002008243.1. NC_010530.1.

3D structure databases

ProteinModelPortalB3RBB4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING164546.RALTA_B1594.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAQ72189; CAQ72189; RALTA_B1594.
GeneID6456063.
KEGGcti:RALTA_B1594.
PATRIC21536873. VBICupTai42494_5044.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMARVWLWSR.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycCTAI164546:GJNE-4789-MONOMER.
CTAI977880:GLC7-4789-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3RBB4_CUPTR
AccessionPrimary (citable) accession number: B3RBB4
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: May 14, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)