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B3RBB4

- B3RBB4_CUPTR

UniProt

B3RBB4 - B3RBB4_CUPTR

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

RALTA_B1594

Organism
Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (02 Sep 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciCTAI164546:GJNE-4789-MONOMER.
    CTAI977880:GLC7-4789-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:RALTA_B1594Imported
    OrganismiCupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424))Imported
    Taxonomic identifieri164546 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
    ProteomesiUP000001692: Chromosome 2

    Interactioni

    Protein-protein interaction databases

    STRINGi164546.RALTA_B1594.

    Structurei

    3D structure databases

    ProteinModelPortaliB3RBB4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiRVWLWSR.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B3RBB4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKAFADLYAA LDGTTSTKAR LGALVDYLRS APAEDAAWAV YFLAGGKPRQ    50
    IVPVSLLRDL ARQAADLPDW LFEESYQAVG DLAETIALLL PDPRDADHAG 100
    LAEWVEQRLL PLRGLPPDAL MPRLDALWRP LDAHGRLVLF KLITGAFRVG 150
    VSRLLVTRAL GEVAGIDPKR VAERMVGYTD LSARPDAARF LALLAPEDED 200
    DRALRAGGQP YPFFLAHPLQ APAEQFDTVL GTPGAWLVEW KWDGIRAQLV 250
    RRGGQTWLWS RGEELITERF PELQQAAATL PDGTVLDGEI VIWQQGRVQP 300
    FALLQQRIGR KTLSARLLRE APAILMAYDL LEWQGEDWRT RPQAERRARL 350
    EQVVAAHVHP ALELSPLVEA DSWERYARLR DASRELGVEG FMLKAAGAAY 400
    GAGRTKDVGV WWKWKIDPYS VDAVLVYAQR GHGRRASLYT DFTFAVWNGP 450
    PGTPGRALVP FAKAYSGLTD DEMRAVDAIV RRTTVEKFGP VRSVEPTQVF 500
    ELGFEGIARS GRHKSGIAVR FPRMLRWRTD KPIDEADTLA TLEAMLPATG 550
    APREDAA 557
    Length:557
    Mass (Da):61,824
    Last modified:September 2, 2008 - v1
    Checksum:iAA36D921BFBA5365
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU633750 Genomic DNA. Translation: CAQ72189.1.
    RefSeqiYP_002008243.1. NC_010530.1.

    Genome annotation databases

    EnsemblBacteriaiCAQ72189; CAQ72189; RALTA_B1594.
    GeneIDi6456063.
    KEGGicti:RALTA_B1594.
    PATRICi21536873. VBICupTai42494_5044.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU633750 Genomic DNA. Translation: CAQ72189.1 .
    RefSeqi YP_002008243.1. NC_010530.1.

    3D structure databases

    ProteinModelPortali B3RBB4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 164546.RALTA_B1594.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAQ72189 ; CAQ72189 ; RALTA_B1594 .
    GeneIDi 6456063.
    KEGGi cti:RALTA_B1594.
    PATRICi 21536873. VBICupTai42494_5044.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi RVWLWSR.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci CTAI164546:GJNE-4789-MONOMER.
    CTAI977880:GLC7-4789-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: R1 / LMG 19424Imported.

    Entry informationi

    Entry nameiB3RBB4_CUPTR
    AccessioniPrimary (citable) accession number: B3RBB4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 2, 2008
    Last sequence update: September 2, 2008
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3