Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ATP-dependent DNA ligase

Gene

RALTA_B1594

Organism
Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCTAI164546:GJNE-4789-MONOMER.
CTAI977880:GLC7-4789-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:RALTA_B1594Imported
OrganismiCupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424))Imported
Taxonomic identifieri164546 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
ProteomesiUP000001692 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi977880.RALTA_B1594.

Structurei

3D structure databases

ProteinModelPortaliB3RBB4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiAAWAVYF.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3RBB4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAFADLYAA LDGTTSTKAR LGALVDYLRS APAEDAAWAV YFLAGGKPRQ
60 70 80 90 100
IVPVSLLRDL ARQAADLPDW LFEESYQAVG DLAETIALLL PDPRDADHAG
110 120 130 140 150
LAEWVEQRLL PLRGLPPDAL MPRLDALWRP LDAHGRLVLF KLITGAFRVG
160 170 180 190 200
VSRLLVTRAL GEVAGIDPKR VAERMVGYTD LSARPDAARF LALLAPEDED
210 220 230 240 250
DRALRAGGQP YPFFLAHPLQ APAEQFDTVL GTPGAWLVEW KWDGIRAQLV
260 270 280 290 300
RRGGQTWLWS RGEELITERF PELQQAAATL PDGTVLDGEI VIWQQGRVQP
310 320 330 340 350
FALLQQRIGR KTLSARLLRE APAILMAYDL LEWQGEDWRT RPQAERRARL
360 370 380 390 400
EQVVAAHVHP ALELSPLVEA DSWERYARLR DASRELGVEG FMLKAAGAAY
410 420 430 440 450
GAGRTKDVGV WWKWKIDPYS VDAVLVYAQR GHGRRASLYT DFTFAVWNGP
460 470 480 490 500
PGTPGRALVP FAKAYSGLTD DEMRAVDAIV RRTTVEKFGP VRSVEPTQVF
510 520 530 540 550
ELGFEGIARS GRHKSGIAVR FPRMLRWRTD KPIDEADTLA TLEAMLPATG

APREDAA
Length:557
Mass (Da):61,824
Last modified:September 2, 2008 - v1
Checksum:iAA36D921BFBA5365
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU633750 Genomic DNA. Translation: CAQ72189.1.

Genome annotation databases

EnsemblBacteriaiCAQ72189; CAQ72189; RALTA_B1594.
KEGGicti:RALTA_B1594.
PATRICi21536873. VBICupTai42494_5044.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU633750 Genomic DNA. Translation: CAQ72189.1.

3D structure databases

ProteinModelPortaliB3RBB4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi977880.RALTA_B1594.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAQ72189; CAQ72189; RALTA_B1594.
KEGGicti:RALTA_B1594.
PATRICi21536873. VBICupTai42494_5044.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiAAWAVYF.
OrthoDBiEOG6Q8HXT.

Enzyme and pathway databases

BioCyciCTAI164546:GJNE-4789-MONOMER.
CTAI977880:GLC7-4789-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: R1 / LMG 19424Imported.

Entry informationi

Entry nameiB3RBB4_CUPTR
AccessioniPrimary (citable) accession number: B3RBB4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: July 22, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.