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B3RBB4

- B3RBB4_CUPTR

UniProt

B3RBB4 - B3RBB4_CUPTR

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene
RALTA_B1594
Organism
Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424))
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCTAI164546:GJNE-4789-MONOMER.
CTAI977880:GLC7-4789-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:RALTA_B1594Imported
OrganismiCupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424))Imported
Taxonomic identifieri164546 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
ProteomesiUP000001692: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi164546.RALTA_B1594.

Structurei

3D structure databases

ProteinModelPortaliB3RBB4.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiRVWLWSR.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3RBB4-1 [UniParc]FASTAAdd to Basket

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MKAFADLYAA LDGTTSTKAR LGALVDYLRS APAEDAAWAV YFLAGGKPRQ    50
IVPVSLLRDL ARQAADLPDW LFEESYQAVG DLAETIALLL PDPRDADHAG 100
LAEWVEQRLL PLRGLPPDAL MPRLDALWRP LDAHGRLVLF KLITGAFRVG 150
VSRLLVTRAL GEVAGIDPKR VAERMVGYTD LSARPDAARF LALLAPEDED 200
DRALRAGGQP YPFFLAHPLQ APAEQFDTVL GTPGAWLVEW KWDGIRAQLV 250
RRGGQTWLWS RGEELITERF PELQQAAATL PDGTVLDGEI VIWQQGRVQP 300
FALLQQRIGR KTLSARLLRE APAILMAYDL LEWQGEDWRT RPQAERRARL 350
EQVVAAHVHP ALELSPLVEA DSWERYARLR DASRELGVEG FMLKAAGAAY 400
GAGRTKDVGV WWKWKIDPYS VDAVLVYAQR GHGRRASLYT DFTFAVWNGP 450
PGTPGRALVP FAKAYSGLTD DEMRAVDAIV RRTTVEKFGP VRSVEPTQVF 500
ELGFEGIARS GRHKSGIAVR FPRMLRWRTD KPIDEADTLA TLEAMLPATG 550
APREDAA 557
Length:557
Mass (Da):61,824
Last modified:September 2, 2008 - v1
Checksum:iAA36D921BFBA5365
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CU633750 Genomic DNA. Translation: CAQ72189.1.
RefSeqiYP_002008243.1. NC_010530.1.

Genome annotation databases

EnsemblBacteriaiCAQ72189; CAQ72189; RALTA_B1594.
GeneIDi6456063.
KEGGicti:RALTA_B1594.
PATRICi21536873. VBICupTai42494_5044.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CU633750 Genomic DNA. Translation: CAQ72189.1 .
RefSeqi YP_002008243.1. NC_010530.1.

3D structure databases

ProteinModelPortali B3RBB4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 164546.RALTA_B1594.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAQ72189 ; CAQ72189 ; RALTA_B1594 .
GeneIDi 6456063.
KEGGi cti:RALTA_B1594.
PATRICi 21536873. VBICupTai42494_5044.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi RVWLWSR.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci CTAI164546:GJNE-4789-MONOMER.
CTAI977880:GLC7-4789-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: R1 / LMG 19424.

Entry informationi

Entry nameiB3RBB4_CUPTR
AccessioniPrimary (citable) accession number: B3RBB4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: May 14, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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