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Protein
Submitted name:

SctC: non flagellar T3S system conserved protein. GSP D family

Gene

sctC

Organism
Cupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CIP 107171 / LMG 19424 / R1) (Ralstonia taiwanensis (strain LMG 19424))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciCTAI164546:GJNE-4459-MONOMER.
CTAI977880:GLC7-4459-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
SctC: non flagellar T3S system conserved protein. GSP D familyImported
Gene namesi
Name:sctCImported
Ordered Locus Names:RALTA_B1260Imported
OrganismiCupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CIP 107171 / LMG 19424 / R1) (Ralstonia taiwanensis (strain LMG 19424))Imported
Taxonomic identifieri977880 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeCupriavidus
Proteomesi
  • UP000001692 Componenti: Chromosome 2

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell projection, Cilium, FlagellumImported

Interactioni

Protein-protein interaction databases

STRINGi977880.RALTA_B1260.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini197 – 335139Secretin_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000214462.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiEOG6423BN.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.

Sequencei

Sequence statusi: Complete.

B3RAD6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMLGHHGEHG STGRATRLPA WRTAAGLLCL AGALLVGTQP ARAADLRWPN
60 70 80 90 100
KPFQASASDK RLADFLRELT ASQGTTAVID PKVEGTISGK FNESAQHVLK
110 120 130 140 150
SVCSMFGLTY YYDGSLLYID VASEARSEVL PIARGSGARL RESLERMQVP
160 170 180 190 200
DSRYPITIND AEGTLMVSGP KRYVETVRAA VRAVDDRAIA DERAEIQLFP
210 220 230 240 250
LKYSWASDFR INRAGKEMTV PGVVTVLRNL YGRNRTLATG TGPSLGTSRG
260 270 280 290 300
ATRQAKLRMG EGGGSGMGIP SADPSQMLDA MGGGGLGLGM QNNWGSGQLP
310 320 330 340 350
QFQADTRLNA VIVRDTPDKM AQYRRLIESL DVKPRLVEIE VTIMDISQAD
360 370 380 390 400
LDSLGVDWRL HTPHVDLQLG GGNGNAGLSF GNLANEAGTT AATIGSGLQF
410 420 430 440 450
TGAIGSDVTR YLLTRVKALA ERGQANFVAR PKVLTLDNTE AALENLQEFY
460 470 480 490 500
VRVDGFQDAG LFNVTAGTAV RVTPLVVDEQ QNRAVMLTID IADGNLSGET
510 520 530 540 550
VDRIPVVRRR SITTQAMVEE GKSLLIAGYT TEEKINASSG VPLLQDVPII
560 570 580
GNLFKYQEKR QNNMERFYLL TPRLVIPGMS
Length:580
Mass (Da):62,651
Last modified:September 2, 2008 - v1
Checksum:i96E3212C9A886F0D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU633750 Genomic DNA. Translation: CAQ71861.1.
RefSeqiWP_012356079.1. NC_010530.1.

Genome annotation databases

EnsemblBacteriaiCAQ71861; CAQ71861; RALTA_B1260.
KEGGicti:RALTA_B1260.
PATRICi21536207. VBICupTai42494_4713.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU633750 Genomic DNA. Translation: CAQ71861.1.
RefSeqiWP_012356079.1. NC_010530.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi977880.RALTA_B1260.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAQ71861; CAQ71861; RALTA_B1260.
KEGGicti:RALTA_B1260.
PATRICi21536207. VBICupTai42494_4713.

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000214462.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiEOG6423BN.

Enzyme and pathway databases

BioCyciCTAI164546:GJNE-4459-MONOMER.
CTAI977880:GLC7-4459-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17343 / BCRC 17206 / CIP 107171 / LMG 19424 / R1Imported.

Entry informationi

Entry nameiB3RAD6_CUPTR
AccessioniPrimary (citable) accession number: B3RAD6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: June 8, 2016
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.