B3R349 (B3R349_CUPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
D-amino acid dehydrogenase small subunit 1 HAMAP MF_01202
EC=1.4.99.1 HAMAP MF_01202

Gene names

Name:	dadA3 EMBL CAQ68729.1
Synonyms:	dadA1 HAMAP MF_01202
Ordered Locus Names:	RALTA_A0757

Organism

Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis (strain LMG 19424)) [Complete proteome] [HAMAP]

Taxonomic identifier

164546 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Cupriavidus

Protein attributes

Sequence length	427 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Oxidative deamination of D-amino acids By similarity. HAMAP MF_01202 SAAS SAAS023080
Catalytic activity	A D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor. HAMAP MF_01202 SAAS SAAS023080
Cofactor	FAD By similarity. HAMAP MF_01202 SAAS SAAS023080
Pathway	Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1. HAMAP MF_01202
Subunit structure	Heterodimer of a small and a large subunit By similarity. HAMAP MF_01202 SAAS SAAS023080
Sequence similarities	Belongs to the DadA oxidoreductase family. HAMAP MF_01202

Ontologies

Keywords
Ligand	FAD HAMAP MF_01202 SAAS SAAS023080 Flavoprotein HAMAP MF_01202 SAAS SAAS023080
Molecular function	Oxidoreductase HAMAP MF_01202 SAAS SAAS023080 EMBL CAQ68729.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	alanine catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	D-amino-acid dehydrogenase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	3 – 17	15	FAD By similarity HAMAP MF_01202

Sequences

	Sequence		Length	Mass (Da)
	B3R349 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 2C2119C2B55A1E82	FASTA	427	45,170
	10 20 30 40 50 60 MRVVIVGAGV VGMTTAWRLA EDGHQVTVLE RHDGPGEETS FANGGQLSYS YVAPLAGPGV 70 80 90 100 110 120 MAKVPGWLLR RDSPMRFRPA ADPAQWRWLA AFMSACNAAT SEATTRKLLR LGFYSRDLMQ 130 140 150 160 170 180 AFVARHQHDD GGAGFSFARR GKLVVHRDAA AFESACRLLD YQASLGCEQQ ALDRDACVAL 190 200 210 220 230 240 EPALAGIRDQ IAGAIHTPSE EVGDCHRFCL SLARLLQDGS YAGVSLRFGT VVQGLVQQGG 250 260 270 280 290 300 RVTGVRTPAG VVPADVVIMS GGIGSVPLLR PLGVRPLLWP LKGYSITVPL AGGARAPHIS 310 320 330 340 350 360 VTDFANKIVY ARIGNTLRVA GMADLVRGGT RIDPERVGTL VAQTRALFPG IVPDEPLAQL 370 380 390 400 410 420 QPWAGLRPAT PDGLPLVGPS RVSGLWLNLG HGALGFTLAM GSAGLLADRL AGRRPAIDAE DFDAARA

References

[1]

"Genome sequence of the beta-rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia." Amadou C., Pascal G., Mangenot S., Glew M., Bontemps C., Capela D., Carrere S., Cruveiller S., Dossat C., Lajus A., Marchetti M., Poinsot V., Rouy Z., Servin B., Saad M., Schenowitz C., Barbe V., Batut J., Medigue C., Masson-Boivin C. Genome Res. 18:1472-1483(2008) [PubMed: 18490699] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU633749 Genomic DNA. Translation: CAQ68729.1.
RefSeq	YP_002004798.1. NC_010528.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B3R349.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6452690.
GenomeReviews	Gene locus RALTA_A0757 in contig CU633749_GR.
KEGG	cti:RALTA_A0757.
PATRIC	21528140. VBICupTai42494_0752.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG729204.
OMA	FTLAMGS.
ProtClustDB	PRK00711.
Family and domain databases
HAMAP	MF_01202. DadA. [Tree]
InterPro	IPR023080. D-aa_DH_ssu_DadA. IPR006076. FAD-dep_OxRdtase. [Graphical view]
KO	K00285.
Pfam	PF01266. DAO. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3R349_CUPTR

Accession

Primary (citable) accession number: B3R349

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)