Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

B3QWJ5

- PDAD_CHLT3

UniProt

B3QWJ5 - PDAD_CHLT3

Protein

Probable pyruvoyl-dependent arginine decarboxylase

Gene

pdaD

Organism
Chloroherpeton thalassium (strain ATCC 35110 / GB-78)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (02 Sep 2008)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    L-arginine = agmatine + CO2.UniRule annotation

    Cofactori

    Pyruvoyl group.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sitei42 – 432Cleavage (non-hydrolytic)UniRule annotation

    GO - Molecular functioni

    1. arginine decarboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. arginine catabolic process Source: InterPro

    Keywords - Molecular functioni

    Decarboxylase, Lyase

    Keywords - Ligandi

    Pyruvate

    Enzyme and pathway databases

    BioCyciCTHA517418:GHTO-2346-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable pyruvoyl-dependent arginine decarboxylaseUniRule annotation (EC:4.1.1.19UniRule annotation)
    Short name:
    PvlArgDCUniRule annotation
    Cleaved into the following 2 chains:
    Pyruvoyl-dependent arginine decarboxylase subunit betaUniRule annotation
    Pyruvoyl-dependent arginine decarboxylase subunit alphaUniRule annotation
    Gene namesi
    Name:pdaDUniRule annotation
    Ordered Locus Names:Ctha_2304
    OrganismiChloroherpeton thalassium (strain ATCC 35110 / GB-78)
    Taxonomic identifieri517418 [NCBI]
    Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChloroherpeton
    ProteomesiUP000001208: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 4242Pyruvoyl-dependent arginine decarboxylase subunit betaUniRule annotationPRO_1000145466Add
    BLAST
    Chaini43 – 182140Pyruvoyl-dependent arginine decarboxylase subunit alphaUniRule annotationPRO_1000145467Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei43 – 431Pyruvic acid (Ser)UniRule annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi517418.Ctha_2304.

    Structurei

    3D structure databases

    ProteinModelPortaliB3QWJ5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PdaD family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1945.
    HOGENOMiHOG000012204.
    KOiK02626.
    OMAiYKMSGKI.
    OrthoDBiEOG6JHRMR.

    Family and domain databases

    Gene3Di3.50.20.10. 1 hit.
    HAMAPiMF_01404. PvlArgDC.
    InterProiIPR016104. Pyr-dep_his/arg-deCO2ase.
    IPR016105. Pyr-dep_his/arg-deCO2ase_sand.
    IPR002724. Pyruvoyl-dep_arg_deCO2ase.
    [Graphical view]
    PfamiPF01862. PvlArgDC. 1 hit.
    [Graphical view]
    PIRSFiPIRSF005216. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
    ProDomiPD010449. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF56271. SSF56271. 1 hit.
    TIGRFAMsiTIGR00286. TIGR00286. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    B3QWJ5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTFVPSKIFF TKGVGRHREY LSSFELALRD AKIEKCNLVT VSSIYPPSCK    50
    RISIEEGLKH LSPGQITFCV MARNSTNERN RLIASSIGVA LPADASQYGY 100
    LSEHHPYGET AEYAGEYAED LAATMLATTL GIEFDSNTAW DEREEVYKMS 150
    GKIVKSFNVT QSAEGDKNGL WTTVISAAIL LP 182
    Length:182
    Mass (Da):20,081
    Last modified:September 2, 2008 - v1
    Checksum:iF765EA2929CAAC0A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001100 Genomic DNA. Translation: ACF14755.1.
    RefSeqiYP_001997202.1. NC_011026.1.

    Genome annotation databases

    EnsemblBacteriaiACF14755; ACF14755; Ctha_2304.
    GeneIDi6423386.
    KEGGicts:Ctha_2304.
    PATRICi21433799. VBIChlTha99257_2691.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001100 Genomic DNA. Translation: ACF14755.1 .
    RefSeqi YP_001997202.1. NC_011026.1.

    3D structure databases

    ProteinModelPortali B3QWJ5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 517418.Ctha_2304.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACF14755 ; ACF14755 ; Ctha_2304 .
    GeneIDi 6423386.
    KEGGi cts:Ctha_2304.
    PATRICi 21433799. VBIChlTha99257_2691.

    Phylogenomic databases

    eggNOGi COG1945.
    HOGENOMi HOG000012204.
    KOi K02626.
    OMAi YKMSGKI.
    OrthoDBi EOG6JHRMR.

    Enzyme and pathway databases

    BioCyci CTHA517418:GHTO-2346-MONOMER.

    Family and domain databases

    Gene3Di 3.50.20.10. 1 hit.
    HAMAPi MF_01404. PvlArgDC.
    InterProi IPR016104. Pyr-dep_his/arg-deCO2ase.
    IPR016105. Pyr-dep_his/arg-deCO2ase_sand.
    IPR002724. Pyruvoyl-dep_arg_deCO2ase.
    [Graphical view ]
    Pfami PF01862. PvlArgDC. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF005216. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
    ProDomi PD010449. Pyruvoyl-dep_arg_deCO2ase. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF56271. SSF56271. 1 hit.
    TIGRFAMsi TIGR00286. TIGR00286. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Chloroherpeton thalassium ATCC 35110."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Liu Z., Li T., Zhao F.
      , Overmann J., Bryant D.A., Richardson P.
      Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 35110 / GB-78.

    Entry informationi

    Entry nameiPDAD_CHLT3
    AccessioniPrimary (citable) accession number: B3QWJ5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 14, 2009
    Last sequence update: September 2, 2008
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3