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B3QW64 (B3QW64_CHLT3) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Aspartate--tRNA ligase HAMAP MF_00044
EC=6.1.1.12 HAMAP MF_00044
Alternative name(s):
Aspartyl-tRNA synthetase HAMAP MF_00044
Gene names
Name:aspS HAMAP MF_00044
Ordered Locus Names:Ctha_0708
OrganismChloroherpeton thalassium (strain ATCC 35110 / GB-78) [Complete proteome] [HAMAP]
Taxonomic identifier517418 [NCBI]
Taxonomic lineageBacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chloroherpeton

Protein attributes

Sequence length604 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp). HAMAP MF_00044

Subunit structure

Homodimer By similarity. HAMAP MF_00044

Subcellular location

Cytoplasm By similarity HAMAP MF_00044.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00044 RuleBase RU003746

Sequences

Sequence LengthMass (Da)Tools
B3QW64 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 262716FB9420C33B

FASTA60468,863
        10         20         30         40         50         60 
METETSEHLH THSNPYRSHF CGKLTKAEVE TSVKLSGWVH RVRDHGGLIF IDLRDYTGVC 

        70         80         90        100        110        120 
QLVLQPEREE IFSLAEHLHV ESVITIVGEV IMRSPETVNP SLSTGEIEVV VESLTIESSA 

       130        140        150        160        170        180 
EPVPFQIADE GNTSEELRLK YRFLDLRREH LRENILFRSK VTSEIRRFLI DGGFHEIQTP 

       190        200        210        220        230        240 
ILTVSSPEGA RDYLVPSRLH PGKFYALPQA PQQFKQLLMV AGFDKYFQIA PCFRDEDARA 

       250        260        270        280        290        300 
DRSPGEFYQL DMEMSFITQD DLFVILENLF QHLTKTFTQK SIRQFPFPRI PFRESMDKYG 

       310        320        330        340        350        360 
TDKPDVRVPL EIQDLSDFFV DSDFKVFSSN CKPGRCVKAL VLKGKGNESR LFYDKAEAHA 

       370        380        390        400        410        420 
KEHGSPGLAY IQFKNEGPKG PILKFLKEGE LQALKERLGL EQGDVVFFGA GAWEKTCKIM 

       430        440        450        460        470        480 
GAMRNYFAPL YPIDKNELAF CWIVDFPMYE YNEDEKKIDF SHNPFSMPQG GMDALTQKDP 

       490        500        510        520        530        540 
LDILAYQYDI VCNGIELSSG AIRNHKPEIM YKAFEIAGYG KEEVERSFGH MLNAFKHGAP 

       550        560        570        580        590        600 
PHGGIAPGVD RLVMILRDEQ NIREVIAFPM NQKAQDLMMG APAEVAPKQL KELHISLNLP 


KKEK

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References

[1]"Complete sequence of Chloroherpeton thalassium ATCC 35110."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Liu Z., Li T., Zhao F. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35110 / GB-78.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001100 Genomic DNA. Translation: ACF13177.1.
RefSeqYP_001995624.1. NC_011026.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB3QW64.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6421753.
GenomeReviewsGene locus Ctha_0708 in contig CP001100_GR.
KEGGcts:Ctha_0708.
PATRIC21430005. VBIChlTha99257_0830.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG396032.
OMAYQLDVEM.
ProtClustDBPRK00476.

Family and domain databases

HAMAPMF_00044_B. Asp_tRNA_synth_B.
[Tree]
InterProIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004524. Asp-tRNA-synth_IIb_bac/mt.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR004115. GAD_dom.
IPR012340. NA-bd_OB-fold.
IPR016027. NA-bd_OB-fold-like.
IPR004365. NA-bd_OB_tRNA-helicase.
[Graphical view]
Gene3DG3DSA:3.30.1360.30. GAD_dom. 1 hit.
G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KOK01876.
PANTHERPTHR22594. aa-tRNA-synt_II. 1 hit.
PTHR22594:SF5. AspS_bac. 1 hit.
PfamPF02938. GAD. 1 hit.
PF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti. 1 hit.
[Graphical view]
PRINTSPR01042. TRNASYNTHASP.
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
SSF55261. SSF55261. 1 hit.
TIGRFAMsTIGR00459. AspS_bact. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3QW64_CHLT3
AccessionPrimary (citable) accession number: B3QW64
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: January 25, 2012
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info