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B3QR00 (GLGA_CHLP8) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Cpar_0227
OrganismChlorobaculum parvum (strain NCIB 8327) (Chlorobium vibrioforme subsp. thiosulfatophilum (strain DSM 263 / NCIB 8327)) [Complete proteome] [HAMAP]
Taxonomic identifier517417 [NCBI]
Taxonomic lineageBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobaculum

Protein attributes

Sequence length488 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 488488Glycogen synthase HAMAP-Rule MF_00484
PRO_1000126058

Sites

Binding site201ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B3QR00 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: EF6D3DFA3C707B89

FASTA48855,232
        10         20         30         40         50         60 
MARRNYKVLY VSGEVSPFVR VSSLADFMAS FPQALEEEGF EARIMMPKYG IINDRKFRLH 

        70         80         90        100        110        120 
DVLRLSDIEV PLKEKTEMLH VKVTALPSSK IQTYFLYNEK HFKRSGLFSD LQLGGDHKGS 

       130        140        150        160        170        180 
AEKLIFFSVG VMETLVRLGW QPDIIHCNDW HAGLVPLLAR TRYAKHDFFK KVKIVQSVHN 

       190        200        210        220        230        240 
VYRQGVFQPK MFQKHLDPEV FDGLEREGDD INLLATGIKY ADLVTTTSPS YAKQIASDPE 

       250        260        270        280        290        300 
SSFGMDKALK ACKDRFHGIL NGMDTRQWNP SSDKLIKKRY SAAQPELKLE DKKVLLEEVG 

       310        320        330        340        350        360 
LPFSEETPVV GVITTFDDVQ GMGLLKESLS KLLELDLQLI VSGSGNKEFE QELRDLVEEH 

       370        380        390        400        410        420 
PEKLAVNTDF TDAFYHQMIA GLDMLIMPSR IESCGMKQMF AMNYGTVPIA YAGGGIVETI 

       430        440        450        460        470        480 
EEVSGDKGTG FVFTDYTAEA LTAKLGEALS MFDDKERWAE LMREGMERDF SWSASAEQYA 


ELYREILG 

« Hide

References

[1]"Complete sequence of Chlorobaculum parvum NCIB 8327."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Zhao F., Li T., Liu Z. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NCIB 8327.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001099 Genomic DNA. Translation: ACF10654.1.
RefSeqYP_001997854.1. NC_011027.1.

3D structure databases

ProteinModelPortalB3QR00.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING517417.Cpar_0227.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACF10654; ACF10654; Cpar_0227.
GeneID6419140.
KEGGcpc:Cpar_0227.
PATRIC21363677. VBIChlPar72705_0223.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMACRLTEQK.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK14098.

Enzyme and pathway databases

BioCycCPAR517417:GH95-241-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_CHLP8
AccessionPrimary (citable) accession number: B3QR00
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: September 2, 2008
Last modified: February 19, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways