Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

B3QQU3 (B3QQU3_CHLP8) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length384 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU004247 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site511Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2801Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1521Substrate By similarity HAMAP-Rule MF_01201
Binding site3281Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue511N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
B3QQU3 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 2036E6A2C17ED69A

FASTA38441,236
        10         20         30         40         50         60 
MSADSRQNSS TADPAAPNLS EALISLGNLR HNLACIQAIS GSRCRIMGIV KADAYGHGAA 

        70         80         90        100        110        120 
QVTATLEEEG IREFGVANIH EAIELKQSHR MQPESRILAF ASPLAGHIEH YLEHDVEMTV 

       130        140        150        160        170        180 
CDHETVRTAE AKAAASGRRL RVQAKIDTGM GRLGVTPEEA HSLLELIDRC PNLDLVGIYT 

       190        200        210        220        230        240 
HFAEGHKAGG FTARQLEQFL DVTGGYEQRT GRTVLKHAAN SGAIVSTPSA RLDMVRPGIL 

       250        260        270        280        290        300 
LYGCHPMDAE PTNVPVKPVM QFQCKVMFVK KVTAGTSISY SRTWSAPTST NIATLSAGYA 

       310        320        330        340        350        360 
DGVHRTLSNK ATVSIGGNRY HQVGTVTMDQ TMVDLGQNRS VKVGDTAVLF GWDGPSAGEQ 

       370        380 
AIAAGTISYE LLCAVSKRVK RVFV 

« Hide

References

[1]"Complete sequence of Chlorobaculum parvum NCIB 8327."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Zhao F., Li T., Liu Z. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NCIB 8327 EMBL ACF10713.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001099 Genomic DNA. Translation: ACF10713.1.
RefSeqYP_001997913.1. NC_011027.1.

3D structure databases

ProteinModelPortalB3QQU3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING517417.Cpar_0286.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACF10713; ACF10713; Cpar_0286.
GeneID6419199.
KEGGcpc:Cpar_0286.
PATRIC21363799. VBIChlPar72705_0284.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAAEININN.
OrthoDBEOG6PP9NJ.

Enzyme and pathway databases

BioCycCPAR517417:GH95-300-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3QQU3_CHLP8
AccessionPrimary (citable) accession number: B3QQU3
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: July 9, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)