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Protein

50S ribosomal protein L1

Gene

rplA

Organism
Chlorobaculum parvum (strain NCIB 8327) (Chlorobium vibrioforme subsp. thiosulfatophilum (strain DSM 263 / NCIB 8327))
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.UniRule annotation
Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRepressorUniRule annotation, Ribonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation, tRNA-bindingUniRule annotation
Biological processTranslation regulationUniRule annotation

Enzyme and pathway databases

BioCyciCPAR517417:G1GC8-1932-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L1UniRule annotation
Gene namesi
Name:rplAUniRule annotation
Ordered Locus Names:Cpar_1886Imported
OrganismiChlorobaculum parvum (strain NCIB 8327) (Chlorobium vibrioforme subsp. thiosulfatophilum (strain DSM 263 / NCIB 8327))Imported
Taxonomic identifieri517417 [NCBI]
Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobaculum
Proteomesi
  • UP000008811 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi517417.Cpar_1886

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL1 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C64 Bacteria
COG0081 LUCA
HOGENOMiHOG000207015
KOiK02863
OMAiGWTDVDV
OrthoDBiPOG091H023J

Family and domain databases

CDDicd00403 Ribosomal_L1, 1 hit
Gene3Di3.40.50.790, 1 hit
HAMAPiMF_01318_B Ribosomal_L1_B, 1 hit
InterProiView protein in InterPro
IPR005878 Ribosom_L1_bac-type
IPR002143 Ribosomal_L1
IPR023674 Ribosomal_L1-like
IPR028364 Ribosomal_L1/biogenesis
IPR016095 Ribosomal_L1_3-a/b-sand
IPR023673 Ribosomal_L1_CS
PfamiView protein in Pfam
PF00687 Ribosomal_L1, 1 hit
PIRSFiPIRSF002155 Ribosomal_L1, 1 hit
SUPFAMiSSF56808 SSF56808, 1 hit
TIGRFAMsiTIGR01169 rplA_bact, 1 hit
PROSITEiView protein in PROSITE
PS01199 RIBOSOMAL_L1, 1 hit

Sequencei

Sequence statusi: Complete.

B3QQS5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGKNYKNAA AKVDRAQEYE LAEAIEKVKE ITTTKFDATI DVAMKLGVDP
60 70 80 90 100
RHADQVVRGT VMLPHGTGKT VSVLVVCKEN KAEEAREAGA DFVGFEDYIE
110 120 130 140 150
KIQNGWTDVD VVVATPDVMG QLGKVARILG PRGLMPNPKS GTVTMDVAKA
160 170 180 190 200
VSEVKAGKIE FRVDKAGNIH APVGKVSFDS DKLAGNIGSF IKEVVRLKPS
210 220
AAKGQYLQGI TISSTMSPGV KVKKDKFVA
Length:229
Mass (Da):24,501
Last modified:September 2, 2008 - v1
Checksum:i13DFBF2092117C62
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001099 Genomic DNA Translation: ACF12278.1
RefSeqiWP_012503111.1, NC_011027.1

Genome annotation databases

EnsemblBacteriaiACF12278; ACF12278; Cpar_1886
KEGGicpc:Cpar_1886

Similar proteinsi

Entry informationi

Entry nameiB3QQS5_CHLP8
AccessioniPrimary (citable) accession number: B3QQS5
Entry historyiIntegrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: March 28, 2018
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health