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B3QJG3 (B3QJG3_RHOPT) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Dihydrodipicolinate synthase EMBL ACF01469.1
EC=4.2.1.52 EMBL ACF01469.1
Gene names
Ordered Locus Names:Rpal_2961
OrganismRhodopseudomonas palustris (strain TIE-1) [Complete proteome] [HAMAP]
Taxonomic identifier395960 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length296 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O. SAAS SAAS005263

Pathway

Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4. SAAS SAAS005263

Subcellular location

Cytoplasm By similarity SAAS SAAS005263.

Sequences

Sequence LengthMass (Da)Tools
B3QJG3 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 354B7AFD90FFDA08

FASTA29631,643
        10         20         30         40         50         60 
MAAKTKFRGS FTALVTPFKN GALDEQAFRS LVNWQIEQGT HGLVPVGTTG ESPTLSHEEH 

        70         80         90        100        110        120 
HKVVEWCIAE AKGRVPVIAG AGSNSTREAV ELARHAEKAG ADAVLVVTPY YNKPTQEGMY 

       130        140        150        160        170        180 
QHFKAVNDAI GIPIIIYNIP PRSVVDMSVD TMSRLYELDN IVGVKDATAN LGRVSQQRHA 

       190        200        210        220        230        240 
MGPDFIQLSG EDMTALAYMA AGGHGCISVV SNIAPKLCSD LMGAVFAGDY PGALKIQDRL 

       250        260        270        280        290 
VPLHDAVFKE PGVAGAKHGL TLLGRIQEEV RLPLMTVTEP TGKAIRAAMV HAGVIN

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References

[1]"Complete sequence of Rhodopseudomonas palustris TIE-1."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Emerson D., Newman D.K., Roden E., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TIE-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001096 Genomic DNA. Translation: ACF01469.1.
RefSeqYP_001991944.1. NC_011004.1.

3D structure databases

ProteinModelPortalB3QJG3.
SMRB3QJG3. Positions 7-292.
ModBaseSearch...

Protein-protein interaction databases

STRINGB3QJG3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6410631.
GenomeReviewsGene locus Rpal_2961 in contig CP001096_GR.
KEGGrpt:Rpal_2961.
PATRIC23310404. VBIRhoPal88240_3006.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG358848.
OMAHGCISVV.
ProtClustDBPRK03170.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002220. Dihydrodipicolinate_synth-like.
IPR020625. Dihydrodipicolinate_synth_AS.
IPR020624. Dihydrodipicolinate_synth_CS.
IPR005263. Dihydrodipicolinate_synth_DapA.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01714.
PANTHERPTHR12128. DHDPS. 1 hit.
PfamPF00701. DHDPS. 1 hit.
[Graphical view]
PIRSFPIRSF001365. DHDPS. 1 hit.
PRINTSPR00146. DHPICSNTHASE.
TIGRFAMsTIGR00674. DapA. 1 hit.
PROSITEPS00665. DHDPS_1. 1 hit.
PS00666. DHDPS_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3QJG3_RHOPT
AccessionPrimary (citable) accession number: B3QJG3
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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