B3QJ50 (B3QJ50_RHOPT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Phosphoheptose isomerase EMBL ACF03006.1

Gene names

Ordered Locus Names:

Rpal_4510

Organism

Rhodopseudomonas palustris (strain TIE-1) [Complete proteome] [HAMAP]

Taxonomic identifier

395960 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	195 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate By similarity. SAAS SAAS020620
Catalytic activity	D-sedoheptulose 7-phosphate = D-glycero-D-manno-heptose 7-phosphate. SAAS SAAS020620
Cofactor	Binds 1 zinc ion per subunit By similarity. SAAS SAAS020620
Pathway	Carbohydrate biosynthesis; D-glycero-D-manno-heptose 7-phosphate biosynthesis; D-glycero-alpha-D-manno-heptose 7-phosphate and D-glycero-beta-D-manno-heptose 7-phosphate from sedoheptulose 7-phosphate: step 1/1. SAAS SAAS020620
Subcellular location	Cytoplasm By similarity SAAS SAAS020620.
Sequence similarities	Contains 1 SIS domain. SAAS SAAS020620

Ontologies

Keywords
Biological process	Carbohydrate metabolism SAAS SAAS020620
Cellular component	Cytoplasm SAAS SAAS020620
Domain	Signal EMBL ACF03006.1
Ligand	Metal-binding SAAS SAAS020620 Zinc SAAS SAAS020620
Molecular function	Isomerase SAAS SAAS020620 EMBL ACF03006.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	D-sedoheptulose 7-phosphate isomerase activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW sugar binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 35	35	Potential EMBL ACF03006.1
	Chain	36 – 195	160	Potential EMBL ACF03006.1		PRO_5000378067

Sequences

	Sequence		Length	Mass (Da)
	B3QJ50 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 2D625EC498A27B1F	FASTA	195	19,818
	10 20 30 40 50 60 MSQDKIAAHF QLSLAAMTAA AGDAALLAAS RAIAAASIKA LKQGRKILLA GNGGSAADAQ 70 80 90 100 110 120 HIAAEIIGRY KRDRAAWPAV ALTTDTSALT AIANDYGFER VFARQVEGLG QPGDVFIGIT 130 140 150 160 170 180 TSGRSPNILA ALEVARQRGL VTVGMTGPSG GSMGALCDHL LVAPGPETAL VQQIHLMAAH 190 AICDEIEAAL GTPAP

References

[1]

"Complete sequence of Rhodopseudomonas palustris TIE-1." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Emerson D., Newman D.K., Roden E., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TIE-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001096 Genomic DNA. Translation: ACF03006.1.
RefSeq	YP_001993481.1. NC_011004.1.
3D structure databases
ProteinModelPortal	B3QJ50.
ModBase	Search...
Protein-protein interaction databases
STRING	B3QJ50.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6412194.
GenomeReviews	Gene locus Rpal_4510 in contig CP001096_GR.
KEGG	rpt:Rpal_4510.
PATRIC	23313537. VBIRhoPal88240_4559.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG671955.
OMA	IGRYKRD.
ProtClustDB	PRK13937.
Family and domain databases
HAMAP	MF_00067. GmhA. [Tree]
InterPro	IPR020620. Phosphoheptose_isomerase. IPR001347. SIS. [Graphical view]
KO	K03271.
Pfam	PF01380. SIS. 1 hit. [Graphical view]
PROSITE	PS51464. SIS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3QJ50_RHOPT

Accession

Primary (citable) accession number: B3QJ50

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)