B3QI56 (B3QI56_RHOPT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Diguanylate cyclase with PAS/PAC sensor EMBL ACF02856.1

Gene names

Ordered Locus Names:

Rpal_4360

Organism

Rhodopseudomonas palustris (strain TIE-1) [Complete proteome] [HAMAP]

Taxonomic identifier

395960 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	338 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro signal transducer activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3QI56 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 6FADE4A1AC0399EB	FASTA	338	37,463
	10 20 30 40 50 60 MPDRGHDGPG QPHPSEPLCQ VTLCECLNEN ALLAKYAIDR IADMIIWLDE HGRVMFVNAA 70 80 90 100 110 120 ATKLLGYSQA EFLSMTVLDL DPLFDADIWR DHWREVESRG SFTLETVNRT KDGVDVAVEV 130 140 150 160 170 180 TVNFVECLGR KMNCSIVRDI TERKRAAEQL AEMHRKLVQA NLTDELTAIA NRRRFDGVLS 190 200 210 220 230 240 TSYATHMRSG APLSLILLDI DHFKAFNDRY GHLEGDRCLQ RIAEVIDRRM FRAADLAARW 250 260 270 280 290 300 GGEEFVCILP DTDEAGALAV ATALREAILD LAIPHEASPI ARVVTASLGV VTATCVPDKT 310 320 330 AHSLFETADA LLYEAKNLGR NRIVRSPSRA ASGAIRPD

References

[1]

"Complete sequence of Rhodopseudomonas palustris TIE-1." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Emerson D., Newman D.K., Roden E., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TIE-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001096 Genomic DNA. Translation: ACF02856.1.
RefSeq	YP_001993331.1. NC_011004.1.
3D structure databases
ProteinModelPortal	B3QI56.
ModBase	Search...
Protein-protein interaction databases
STRING	B3QI56.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6412044.
GenomeReviews	Gene locus Rpal_4360 in contig CP001096_GR.
KEGG	rpt:Rpal_4360.
PATRIC	23313229. VBIRhoPal88240_4405.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG638920.
OMA	VFANEAF.
ProtClustDB	CLSK924296.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR000160. Diguanylate_cyclase-pred. IPR001610. PAC. IPR000014. PAS. IPR013656. PAS_4. [Graphical view]
Pfam	PF00990. GGDEF. 1 hit. PF08448. PAS_4. 1 hit. [Graphical view]
SMART	SM00267. GGDEF. 1 hit. SM00086. PAC. 1 hit. SM00091. PAS. 1 hit. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit. TIGR00229. Sensory_box. 1 hit.
PROSITE	PS50887. GGDEF. 1 hit. PS50112. PAS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3QI56_RHOPT

Accession

Primary (citable) accession number: B3QI56

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)