B3QH22 (B3QH22_RHOPT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-agarase EMBL ACF01211.1
EC=3.2.1.81 EMBL ACF01211.1

Gene names

Ordered Locus Names:

Rpal_2702

Organism

Rhodopseudomonas palustris (strain TIE-1) [Complete proteome] [HAMAP]

Taxonomic identifier

395960 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	475 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ACF01211.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	beta-agarase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3QH22 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 5C7ADCA131B651D7	FASTA	475	52,593
	10 20 30 40 50 60 MTGVNVTALR PSEDLRGQQG AAAHGADRHD GMTELARTRW GGLADRKVDA SGFFRTEQID 70 80 90 100 110 120 GVWWFIDPDG GRFLSKGVVS VQFDHDNVQG TDRRPYREAC TRKYGSREAW RRVAADRLTS 130 140 150 160 170 180 WGFNTLGAWS EPEIARAGTV PLASAAGVVY VATAFGEQRG GWPLCDIFEP EFEQFARAHA 190 200 210 220 230 240 RKVCTPQSDD PHVLGWFTDN ELPWGPDWRG ENELLPTILR AMDAPFSRRA ALALLKSRYD 250 260 270 280 290 300 SIDQFNAAWQ CKLPSWDDLA ATPLQPPPFS RNFFSNDRAQ EHDPIARGYF ADCDAFAGLL 310 320 330 340 350 360 AERYLSVCAT AIRAADPNHL VLGARFAYVP PRDVVDAAGR YCDVISVNCY DPLPDAVIDG 370 380 390 400 410 420 YAETGRPCLI GEYSFRGDDA GLPNTHGAGP RMPTQRERAA GFTRYTTAAL RHPALIGYHW 430 440 450 460 470 FVHADQPAQG RWDGEDSNYG VVTIEDEVYP ELTQAMTALN AEAERIHVET APVLA

References

[1]

"Complete sequence of Rhodopseudomonas palustris TIE-1." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Emerson D., Newman D.K., Roden E., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TIE-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001096 Genomic DNA. Translation: ACF01211.1.
RefSeq	YP_001991686.1. NC_011004.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B3QH22.
Protein family/group databases
CAZy	GH50. Glycoside Hydrolase Family 50.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6410366.
GenomeReviews	Gene locus Rpal_2702 in contig CP001096_GR.
KEGG	rpt:Rpal_2702.
PATRIC	23309860. VBIRhoPal88240_2740.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG660148.
OMA	RFLSKGV.
ProtClustDB	CLSK819549.
Family and domain databases
InterPro	IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3QH22_RHOPT

Accession

Primary (citable) accession number: B3QH22

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)