B3QGL2 (B3QGL2_RHOPT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Translation initiation factor IF-1 EMBL ACF02689.1

Gene names

Ordered Locus Names:

Rpal_4193

Organism

Rhodopseudomonas palustris (strain TIE-1) [Complete proteome] [HAMAP]

Taxonomic identifier

395960 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	92 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Contains 1 S1-like domain. RuleBase RU004366

Ontologies

Keywords
Biological process	Protein biosynthesis
Molecular function	Initiation factor EMBL ACF02689.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	translation initiation factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3QGL2 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: B61A435AD625BC2A	FASTA	92	10,577
	10 20 30 40 50 60 MAKEELIQFE GLVTEILPDA RYRVQLDTGH EIVAYTAGKM KKNRIKTLAG DRVTVEMSPY 70 80 90 DLEKGRLIFR HKDERPGGPP RSGPPRGQFR RR

References

[1]

"Complete sequence of Rhodopseudomonas palustris TIE-1." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Emerson D., Newman D.K., Roden E., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TIE-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001096 Genomic DNA. Translation: ACF02689.1.
RefSeq	YP_001993164.1. NC_011004.1.
3D structure databases
ProteinModelPortal	B3QGL2.
ModBase	Search...
Protein-protein interaction databases
STRING	B3QGL2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6411877.
GenomeReviews	Gene locus Rpal_4193 in contig CP001096_GR.
KEGG	rpt:Rpal_4193.
PATRIC	23312893. VBIRhoPal88240_4237.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG286099.
OMA	VQLDAGH.
ProtClustDB	PRK00276.
Family and domain databases
HAMAP	MF_00075. IF_1. [Tree]
InterPro	IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR022967. RNA-binding_domain_S1. IPR006196. RNA-binding_domain_S1_IF1. IPR004368. TIF_IF1. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K02518.
Pfam	PF01176. eIF-1a. 1 hit. [Graphical view]
SMART	SM00316. S1. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00008. InfA. 1 hit.
PROSITE	PS50832. S1_IF1_TYPE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3QGL2_RHOPT

Accession

Primary (citable) accession number: B3QGL2

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)