B3QGK5 (B3QGK5_RHOPT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Urease accessory protein UreD HAMAP MF_01384

Gene names

Name:	ureD HAMAP MF_01384
Ordered Locus Names:	Rpal_4186

Organism

Rhodopseudomonas palustris (strain TIE-1) [Complete proteome] [HAMAP]

Taxonomic identifier

395960 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	305 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter By similarity. HAMAP MF_01384 SAAS SAAS002669
Subunit structure	UreD, UreF and UreG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of UreC. The UreE protein probably delivers the nickel By similarity. HAMAP MF_01384
Subcellular location	Cytoplasm By similarity HAMAP MF_01384 SAAS SAAS002669.
Sequence similarities	Belongs to the UreD family. HAMAP MF_01384

Ontologies

Keywords
Biological process	Nickel insertion HAMAP MF_01384 SAAS SAAS002669
Cellular component	Cytoplasm HAMAP MF_01384 SAAS SAAS002669
Molecular function	Chaperone HAMAP MF_01384 SAAS SAAS002669
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	nitrogen compound metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	nickel cation binding Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3QGK5 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 48B5B368CD323CC7	FASTA	305	32,273
	10 20 30 40 50 60 MLGARKCVQG GTRECAAVVA APRILGMMAT DTSLTTSQTF AANRAVGEVA VEVRADGGVT 70 80 90 100 110 120 RRGPVHEAGS LRVRFPSPEQ QGLSAVLVNT AGGVAGGDRF SISLDVQADA RLTLTTAAAE 130 140 150 160 170 180 KVYRSHGPAA QLDIKLKVAS GGHLAWLPQE TILFDHACAE RRIDIELADD ASLMLSEMVI 190 200 210 220 230 240 FGRSAMGETM QHGRFVDRWR MRRGGKLVFA ETVRLDGEIG SLFGRPAVMN GGVAIGTALI 250 260 270 280 290 300 VPGDAALVER LREAADTFGA EVGISAWNGF AMARFCAQNA AKLRADMMTV LGRAAGRALP RLWLS

References

[1]

"Complete sequence of Rhodopseudomonas palustris TIE-1." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Emerson D., Newman D.K., Roden E., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TIE-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001096 Genomic DNA. Translation: ACF02682.1.
RefSeq	YP_001993157.1. NC_011004.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B3QGK5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6411870.
GenomeReviews	Gene locus Rpal_4186 in contig CP001096_GR.
KEGG	rpt:Rpal_4186.
PATRIC	23312877. VBIRhoPal88240_4229.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG711156.
OMA	QETILFD.
ProtClustDB	CLSK818584.
Family and domain databases
HAMAP	MF_01384. UreD. [Tree]
InterPro	IPR002669. UreD. [Graphical view]
KO	K03190.
Pfam	PF01774. UreD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3QGK5_RHOPT

Accession

Primary (citable) accession number: B3QGK5

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)