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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Rpal_2567

Organism
Rhodopseudomonas palustris (strain TIE-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciRPAL395960:GHPC-2587-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported
Gene namesi
Ordered Locus Names:Rpal_2567Imported
OrganismiRhodopseudomonas palustris (strain TIE-1)Imported
Taxonomic identifieri395960 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001725 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi395960.Rpal_2567.

Structurei

3D structure databases

ProteinModelPortaliB3QFK7.
SMRiB3QFK7. Positions 2-423.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiDFYAVKA.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3QFK7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNSELLTRR QTAVVRGVSQ ATPVFAERAL NSEIWDVEGK RYVDFAGGIA
60 70 80 90 100
VLNTGHCHPR IVAAIREQLD RFTHTCFQVA PYEGYIRLAE RLNQLAPING
110 120 130 140 150
PLKSILLSTG AEATENAVKI ARAATGRSGV IAFTGGFHGR TAFASAMTGK
160 170 180 190 200
VIPYKKALGP PLPGVWHVPF PVAGSDVSVE DALRCVQFVF KADIDASQVA
210 220 230 240 250
AIIIEPVQGE GGFHQAPPEL MRGLRRLCDE NGIVLIADEV QTGFGRTGKM
260 270 280 290 300
FAMEHYDVQA DIVCVAKSLA GGLPLSGVIG RAAIMDAAEP GGLGGTYAGN
310 320 330 340 350
PLACAAALAV LDVFEEENLI ARANQIGERL RSAIDRFALS NTLVPTSVAR
360 370 380 390 400
GPGAMVAFDI LKQRGSNEPD AEATRRVTRL AHENGLILLS CGTAANTIRI
410 420
LVPLTASDAI VDEGLAILER CLAA
Length:424
Mass (Da):44,883
Last modified:September 1, 2008 - v1
Checksum:iAD3E6B04DD2077E5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001096 Genomic DNA. Translation: ACF01080.1.
RefSeqiWP_012495811.1. NC_011004.1.
YP_001991555.1. NC_011004.1.

Genome annotation databases

EnsemblBacteriaiACF01080; ACF01080; Rpal_2567.
KEGGirpt:Rpal_2567.
PATRICi23309578. VBIRhoPal88240_2601.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001096 Genomic DNA. Translation: ACF01080.1.
RefSeqiWP_012495811.1. NC_011004.1.
YP_001991555.1. NC_011004.1.

3D structure databases

ProteinModelPortaliB3QFK7.
SMRiB3QFK7. Positions 2-423.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395960.Rpal_2567.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACF01080; ACF01080; Rpal_2567.
KEGGirpt:Rpal_2567.
PATRICi23309578. VBIRhoPal88240_2601.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiDFYAVKA.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciRPAL395960:GHPC-2587-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TIE-1Imported.

Entry informationi

Entry nameiB3QFK7_RHOPT
AccessioniPrimary (citable) accession number: B3QFK7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2008
Last sequence update: September 1, 2008
Last modified: March 31, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.