B3QF45 (B3QF45_RHOPT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
5-aminolevulinic acid synthase EMBL ACE99479.1
EC=2.3.1.37 EMBL ACE99479.1

Gene names

Ordered Locus Names:

Rpal_0922

Organism

Rhodopseudomonas palustris (strain TIE-1) [Complete proteome] [HAMAP]

Taxonomic identifier

395960 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	409 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU003693
Sequence similarities	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003693

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003693
Molecular function	Acyltransferase EMBL ACE99479.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tetrapyrrole biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	5-aminolevulinate synthase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring nitrogenous groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3QF45 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 707E3FC9C1BDB6D7	FASTA	409	44,754
	10 20 30 40 50 60 MQYNQFFQDA LTRLHDERRY RVFADLERMA GRFPHATWHS NSGPRDVVIW CSNDYLGMGQ 70 80 90 100 110 120 HPKVVGAMVE TATRIGTGAG GTRNIAGTHH PLVQLEQEIA SLHGKEAALL FTSGYVSNQT 130 140 150 160 170 180 GLSTLGKLIP NCLILSDALN HNSMIEGIRQ SGCERVVWRH NDTAHLEELL IAAGPDRPKL 190 200 210 220 230 240 IAFESLYSMD GDTAPLAKIC DLAEKYNAMT YCDEVHAVGM YGAHGAGVAE RDGVMDRIDI 250 260 270 280 290 300 IEATLAKAFG CLGGYITGKN EVIDAVRSYA PGFIFTTSLP PPICAAATAA IKHLRSSTWE 310 320 330 340 350 360 RERHQDRAAR VKAVLNNAGI PVMPTDTHIV PVFVGDAEKC KKASDLLLEQ HNIYIQPINY 370 380 390 400 PTVARGLERL RITPSPYHDD KLIDALAEAL VQVWNELGLP LGAKAIAAE

References

[1]

"Complete sequence of Rhodopseudomonas palustris TIE-1." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Emerson D., Newman D.K., Roden E., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TIE-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001096 Genomic DNA. Translation: ACE99479.1.
RefSeq	YP_001989955.1. NC_011004.1.
3D structure databases
ProteinModelPortal	B3QF45.
SMR	B3QF45. Positions 2-394.
ModBase	Search...
Protein-protein interaction databases
STRING	B3QF45.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6408576.
GenomeReviews	Gene locus Rpal_0922 in contig CP001096_GR.
KEGG	rpt:Rpal_0922.
PATRIC	23306250. VBIRhoPal88240_0947.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG649839.
OMA	HLKESNE.
ProtClustDB	PRK09064.
Family and domain databases
InterPro	IPR010961. 4pyrrol_synth_NH2levulA_synth. IPR001917. Aminotrans_II_pyridoxalP_BS. IPR004839. Aminotransferase_I/II. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K00643.
Pfam	PF00155. Aminotran_1_2. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01821. 5aminolev_synth. 1 hit.
PROSITE	PS00599. AA_TRANSFER_CLASS_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3QF45_RHOPT

Accession

Primary (citable) accession number: B3QF45

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)