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B3QER0 (B3QER0_RHOPT) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rpal_2462 EMBL ACF00976.1
OrganismRhodopseudomonas palustris (strain TIE-1) [Complete proteome] [HAMAP] EMBL ACF00976.1
Taxonomic identifier395960 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length366 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B3QER0 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 88E77D6321B17DAD

FASTA36638,509
        10         20         30         40         50         60 
MSERIIVTYQ VAAAPAEIAA RAEALAIEQS VECPLAAVTE QQIRDEIVGR VEAIAPIGET 

        70         80         90        100        110        120 
RFSVRVSLAS ATAPAEPGQL LNMLFGNSSI QPDVTLADVE LPPAYPAAFG GPKLGISGLR 

       130        140        150        160        170        180 
AKLGAPRRAL TGSALKPQGL APEALAGLAH RLALGGVDLI KDDHGIADQA FSPFAARVPA 

       190        200        210        220        230        240 
VARAMREACA VRGAAMLYAP HVSGSLDDMR RQLDIVRREG LSVVMLMPMI VGLANFHLIA 

       250        260        270        280        290        300 
KEAEGLIVLA HPSLAGAQRI APDLLLGKLF RLLGADATIF PHYGGRFAYT PETCRALADA 

       310        320        330        340        350        360 
ARRDWHDLKP CLPVPAGGIA IDRIKELLAF YGTDVMLLIG GSLLAAGEQL TEHAARFTAE 


VASHGQ 

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris TIE-1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Emerson D., Newman D.K., Roden E., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TIE-1 EMBL ACF00976.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001096 Genomic DNA. Translation: ACF00976.1.
RefSeqYP_001991451.1. NC_011004.1.

3D structure databases

ProteinModelPortalB3QER0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395960.Rpal_2462.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACF00976; ACF00976; Rpal_2462.
GeneID6410124.
KEGGrpt:Rpal_2462.
PATRIC23309370. VBIRhoPal88240_2497.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230274.
KOK01601.
OMAIEQSVEC.
OrthoDBEOG6MM1J2.
ProtClustDBCLSK924162.

Enzyme and pathway databases

BioCycRPAL395960:GHPC-2482-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 2 hits.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3QER0_RHOPT
AccessionPrimary (citable) accession number: B3QER0
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: January 22, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)