B3QAJ2 (B3QAJ2_RHOPT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Error-prone DNA polymerase HAMAP MF_01902
EC=2.7.7.7 HAMAP MF_01902

Gene names

Name:	dnaE2 HAMAP MF_01902
Ordered Locus Names:	Rpal_2006

Organism

Rhodopseudomonas palustris (strain TIE-1) [Complete proteome] [HAMAP]

Taxonomic identifier

395960 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	1195 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase By similarity. HAMAP MF_01902
Catalytic activity	Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). HAMAP MF_01902 SAAS SAAS004013
Subcellular location	Cytoplasm By similarity HAMAP MF_01902 SAAS SAAS004013.
Sequence similarities	Belongs to the DNA polymerase type-C family. DnaE2 subfamily. HAMAP MF_01902

Ontologies

Keywords
Biological process	DNA damage DNA repair HAMAP MF_01902 SAAS SAAS004013 DNA replication HAMAP MF_01902 SAAS SAAS004013
Cellular component	Cytoplasm HAMAP MF_01902 SAAS SAAS004013
Molecular function	DNA-directed DNA polymerase HAMAP MF_01902 SAAS SAAS004013 Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA repair Inferred from electronic annotation. Source: HAMAP DNA replication Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	3'-5' exonuclease activity Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed DNA polymerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3QAJ2 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 996139FBD5AB8BE2	FASTA	1,195	133,299
	10 20 30 40 50 60 MSARYAEIGV TTNFSFLEGG SHPQDYVHEA SRLGLDAIGI ADRNTLAGVV RAFSEFDNEE 70 80 90 100 110 120 LIHKPKLLIG TRLCFADGTP DLLAYPTDRA AYGRLCRLLS AGKLRAGKGE CHLTFADLEA 130 140 150 160 170 180 FIHERSPSIH ELATVIHPPS ASINQPSASI HQFPTPSWPG LTRPSTPTSK VVLVSVDARV 190 200 210 220 230 240 KPGHDGGKRV ADNSQILLVV MPSYLFQTKT IAIALERLTA LNADAVWLGL TPYYRGDDKR 250 260 270 280 290 300 RLARLRRIAA AARVPCIATN DVLYHHPRRR ALQDVLTCVR EKTSIDKAGR RLEGNAERHL 310 320 330 340 350 360 KPAAEMARLF RADPEAIAET LRFANRISFT LDELKYHYPD EPVPPGKTAQ QHLEDLTREG 370 380 390 400 410 420 IAAYFPNGIS DKLQATIAKE LAIIERRGYA HYFLTVHDIV RYARSQDILC QGRGSAANSA 430 440 450 460 470 480 VCYVLGITCV DPTEIDLLFE RFVSEERDEP PDIDVDFEHS RREEVMQYIY RRYGRHRAAI 490 500 510 520 530 540 VATVIHYRPR SAIRDVGKAL GLSEDVTAAL ADTVWGSWGK GLNEMQVRQA GLDPHNPMIG 550 560 570 580 590 600 RAVELATELI GFPRHLSQHV GGYVLTQDRL DSYVPIGNAA MEDRTFIEWD KDDIDAVKMM 610 620 630 640 650 660 KVDVLALGML TCIRKGFHLI AQHKGVRFQL SDIKSEDDNA VYKMLQRGES IGVFQVESRA 670 680 690 700 710 720 QMNMLPRLKP RCFYDLVIEV AIVRPGPIQG DMVHPYLRRR NGQEPVVYPS PSGEAGDKNE 730 740 750 760 770 780 LQQILGKTLG VPLFQEQAMR IAIEAAHFTP DEANQLRRAM ATFRNVGTIG KFEAKMIGNL 790 800 810 820 830 840 VKRGYDATFA KNCFEQIKGF GSYGFPESHA ASFAKLVYVS AWMKCEHPDA FCCALLNSQP 850 860 870 880 890 900 MGFYAPAQIV GDARSNGVEV RPVDVSFSEG QCTLEERCGR HHAVRLGFRM IDGFRWADPD 910 920 930 940 950 960 EERVQLEAGE PPSDDWAARI VTARARGAFS SLEQFARITA MSKRALILLA DADAFRSLGL 970 980 990 1000 1010 1020 DRRAALWAVR RLPDDVPLPL FEAASAREQQ DEHAAPLPAM PMAEHVVADY QTVRLSLKGH 1030 1040 1050 1060 1070 1080 PMEFLRALFA AERVVTCREL SRSEQRASGR WLRCAGVVLV RQRPGSANGV IFMTIEDETG 1090 1100 1110 1120 1130 1140 IANIVVWPAI MEKFRKEVMG ARLVLVEGKV QASPEGVVHL VAERLIDRSA EMGRLAEGLV 1150 1160 1170 1180 1190 RPALPDGADL YEPLTSEKYN YEALNGDRRD TPDAPAQRHR HPRDVRILPP SRDFH

References

[1]

"Complete sequence of Rhodopseudomonas palustris TIE-1." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Emerson D., Newman D.K., Roden E., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TIE-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001096 Genomic DNA. Translation: ACF00529.1.
RefSeq	YP_001991004.1. NC_011004.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B3QAJ2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6409666.
GenomeReviews	Gene locus Rpal_2006 in contig CP001096_GR.
KEGG	rpt:Rpal_2006.
PATRIC	23308453. VBIRhoPal88240_2041.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG734490.
OMA	EQPAIRL.
ProtClustDB	PRK05672.
Family and domain databases
HAMAP	MF_01902. DNApol_error_prone. [Tree]
InterPro	IPR011708. DNA_pol3_alpha. IPR023073. DNA_pol_error_prone. IPR004365. NA-bd_OB_tRNA-helicase. IPR004013. PHP_C. IPR003141. Pol/His_phosphatase_N. IPR004805. PolC_alpha. [Graphical view]
KO	K14162.
Pfam	PF07733. DNA_pol3_alpha. 1 hit. PF02811. PHP. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
SMART	SM00481. POLIIIAc. 1 hit. [Graphical view]
TIGRFAMs	TIGR00594. Polc. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3QAJ2_RHOPT

Accession

Primary (citable) accession number: B3QAJ2

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)