B3QAG7 (RL28_RHOPT) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L28

Gene names

Name:	rpmB
Ordered Locus Names:	Rpal_0494

Organism

Rhodopseudomonas palustris (strain TIE-1) [Complete proteome] [HAMAP]

Taxonomic identifier

395960 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	101 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L28P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 101	101	50S ribosomal protein L28 HAMAP MF_00373		PRO_1000121679

Sequences

	Sequence		Length	Mass (Da)
	B3QAG7 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: CBF6B136F96AC824	FASTA	101	10,979
	10 20 30 40 50 60 MSRRCELTAK GAQVGHKVSH SNIKTKRRFL PNLVNVTFLS DTLGRAVRLR VSTNALKSVD 70 80 90 100 HRGGLDAYLL KAREAELSPK AVELKRAIAK KMAGEPVAAA S

References

[1]

"Complete sequence of Rhodopseudomonas palustris TIE-1." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Emerson D., Newman D.K., Roden E., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TIE-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001096 Genomic DNA. Translation: ACE99053.1.
RefSeq	YP_001989529.1. NC_011004.1.
3D structure databases
ProteinModelPortal	B3QAG7.
ModBase	Search...
Protein-protein interaction databases
STRING	B3QAG7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6408143.
GenomeReviews	Gene locus Rpal_0494 in contig CP001096_GR.
KEGG	rpt:Rpal_0494.
PATRIC	23305373. VBIRhoPal88240_0513.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG597003.
OMA	ELSMRAR.
ProtClustDB	PRK00359.
Family and domain databases
HAMAP	MF_00373. Ribosomal_L28. [Tree]
InterPro	IPR001383. Ribosomal_L28. [Graphical view]
KO	K02902.
Pfam	PF00830. Ribosomal_L28. 1 hit. [Graphical view]
TIGRFAMs	TIGR00009. L28. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RL28_RHOPT

Accession

Primary (citable) accession number: B3QAG7

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	September 2, 2008
Last modified:	January 25, 2012
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program