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B3Q9Y8 (B3Q9Y8_RHOPT) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rpal_3541 EMBL ACF02041.1
OrganismRhodopseudomonas palustris (strain TIE-1) [Complete proteome] [HAMAP] EMBL ACF02041.1
Taxonomic identifier395960 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length457 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B3Q9Y8 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 6C5FD907CD826724

FASTA45750,977
        10         20         30         40         50         60 
MSARILVVDD IPANVKLLED RLSAEYFDVI TASNGIQALE ICQRAECDIV LLDVMMPDMD 

        70         80         90        100        110        120 
GFEVCRRLKS NPKTHFIPVV MVTALDSPAD RVRGLEAGAD DFLTKPVSDV VLIARVRSLT 

       130        140        150        160        170        180 
RLKMMTDELR MRAITSLEIG MQAPEREAVA DQGKGGRILL VDDRPSSYER LAPLLSAEHD 

       190        200        210        220        230        240 
VDVETNPSEA LFHAADGNYD LLIVSLGLEN FDGLRLCSQA RSLERTRHVP ILAIAEAENN 

       250        260        270        280        290        300 
ARLLRGLEIG VNDYLLRPVD KNELMARART QIRRRRYTDH LRDNVQHSIE MAITDGLTGL 

       310        320        330        340        350        360 
HNRRYMESHL ATLAEQAGAR GKPLALMILD IDFFKSINDS YGHDAGDDVL REFALRIKKS 

       370        380        390        400        410        420 
IRGIDLACRY GGEEFVIVMP ETDLHVAQMV AERLRRAIAG EPFAIEKGTR RIEVTISIGL 

       430        440        450 
STLERKGEPI PDLLKRADTA LYRAKHDGRN RVVAAAA 

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris TIE-1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Emerson D., Newman D.K., Roden E., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TIE-1 EMBL ACF02041.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001096 Genomic DNA. Translation: ACF02041.1.
RefSeqYP_001992516.1. NC_011004.1.

3D structure databases

ProteinModelPortalB3Q9Y8.
SMRB3Q9Y8. Positions 2-457.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395960.Rpal_3541.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACF02041; ACF02041; Rpal_3541.
GeneID6411215.
KEGGrpt:Rpal_3541.
PATRIC23311582. VBIRhoPal88240_3590.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3706.
HOGENOMHOG000167204.
KOK02488.
OMASIGLAQE.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycRPAL395960:GHPC-3574-MONOMER.

Family and domain databases

InterProIPR001054. A/G_cyclase.
IPR011006. CheY-like_superfamily.
IPR000160. GGDEF_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF00990. GGDEF. 1 hit.
PF00072. Response_reg. 2 hits.
[Graphical view]
SMARTSM00267. GGDEF. 1 hit.
SM00448. REC. 2 hits.
[Graphical view]
SUPFAMSSF52172. SSF52172. 2 hits.
SSF55073. SSF55073. 1 hit.
TIGRFAMsTIGR00254. GGDEF. 1 hit.
PROSITEPS50887. GGDEF. 1 hit.
PS50110. RESPONSE_REGULATORY. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3Q9Y8_RHOPT
AccessionPrimary (citable) accession number: B3Q9Y8
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)