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Protein
Submitted name:

Response regulator receiver modulated diguanylate cyclase

Gene

Rpal_3541

Organism
Rhodopseudomonas palustris (strain TIE-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  1. phosphorelay signal transduction system Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciRPAL395960:GHPC-3574-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Response regulator receiver modulated diguanylate cyclaseImported
Gene namesi
Ordered Locus Names:Rpal_3541Imported
OrganismiRhodopseudomonas palustris (strain TIE-1)Imported
Taxonomic identifieri395960 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001725 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi395960.Rpal_3541.

Structurei

3D structure databases

ProteinModelPortaliB3Q9Y8.
SMRiB3Q9Y8. Positions 2-457.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3706.
HOGENOMiHOG000167204.
KOiK02488.
OMAiYLELEWR.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00990. GGDEF. 1 hit.
PF00072. Response_reg. 2 hits.
[Graphical view]
SMARTiSM00267. GGDEF. 1 hit.
SM00448. REC. 2 hits.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 2 hits.
SSF55073. SSF55073. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50887. GGDEF. 1 hit.
PS50110. RESPONSE_REGULATORY. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3Q9Y8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSARILVVDD IPANVKLLED RLSAEYFDVI TASNGIQALE ICQRAECDIV
60 70 80 90 100
LLDVMMPDMD GFEVCRRLKS NPKTHFIPVV MVTALDSPAD RVRGLEAGAD
110 120 130 140 150
DFLTKPVSDV VLIARVRSLT RLKMMTDELR MRAITSLEIG MQAPEREAVA
160 170 180 190 200
DQGKGGRILL VDDRPSSYER LAPLLSAEHD VDVETNPSEA LFHAADGNYD
210 220 230 240 250
LLIVSLGLEN FDGLRLCSQA RSLERTRHVP ILAIAEAENN ARLLRGLEIG
260 270 280 290 300
VNDYLLRPVD KNELMARART QIRRRRYTDH LRDNVQHSIE MAITDGLTGL
310 320 330 340 350
HNRRYMESHL ATLAEQAGAR GKPLALMILD IDFFKSINDS YGHDAGDDVL
360 370 380 390 400
REFALRIKKS IRGIDLACRY GGEEFVIVMP ETDLHVAQMV AERLRRAIAG
410 420 430 440 450
EPFAIEKGTR RIEVTISIGL STLERKGEPI PDLLKRADTA LYRAKHDGRN

RVVAAAA
Length:457
Mass (Da):50,977
Last modified:September 1, 2008 - v1
Checksum:i6C5FD907CD826724
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001096 Genomic DNA. Translation: ACF02041.1.
RefSeqiWP_011158677.1. NC_011004.1.
YP_001992516.1. NC_011004.1.

Genome annotation databases

EnsemblBacteriaiACF02041; ACF02041; Rpal_3541.
KEGGirpt:Rpal_3541.
PATRICi23311582. VBIRhoPal88240_3590.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001096 Genomic DNA. Translation: ACF02041.1.
RefSeqiWP_011158677.1. NC_011004.1.
YP_001992516.1. NC_011004.1.

3D structure databases

ProteinModelPortaliB3Q9Y8.
SMRiB3Q9Y8. Positions 2-457.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395960.Rpal_3541.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACF02041; ACF02041; Rpal_3541.
KEGGirpt:Rpal_3541.
PATRICi23311582. VBIRhoPal88240_3590.

Phylogenomic databases

eggNOGiCOG3706.
HOGENOMiHOG000167204.
KOiK02488.
OMAiYLELEWR.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciRPAL395960:GHPC-3574-MONOMER.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00990. GGDEF. 1 hit.
PF00072. Response_reg. 2 hits.
[Graphical view]
SMARTiSM00267. GGDEF. 1 hit.
SM00448. REC. 2 hits.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 2 hits.
SSF55073. SSF55073. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50887. GGDEF. 1 hit.
PS50110. RESPONSE_REGULATORY. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TIE-1Imported.

Entry informationi

Entry nameiB3Q9Y8_RHOPT
AccessioniPrimary (citable) accession number: B3Q9Y8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2008
Last sequence update: September 1, 2008
Last modified: March 31, 2015
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.