B3Q9Y8 (B3Q9Y8_RHOPT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Response regulator receiver modulated diguanylate cyclase EMBL ACF02041.1

Gene names

Ordered Locus Names:

Rpal_3541

Organism

Rhodopseudomonas palustris (strain TIE-1) [Complete proteome] [HAMAP] EMBL ACF02041.1

Taxonomic identifier

395960 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas › Rhodopseudomonas palustris

Protein attributes

Sequence length	457 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular_function	phosphorelay response regulator activity Inferred from electronic annotation. Source: InterPro phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3Q9Y8 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 6C5FD907CD826724	FASTA	457	50,977
	10 20 30 40 50 60 MSARILVVDD IPANVKLLED RLSAEYFDVI TASNGIQALE ICQRAECDIV LLDVMMPDMD 70 80 90 100 110 120 GFEVCRRLKS NPKTHFIPVV MVTALDSPAD RVRGLEAGAD DFLTKPVSDV VLIARVRSLT 130 140 150 160 170 180 RLKMMTDELR MRAITSLEIG MQAPEREAVA DQGKGGRILL VDDRPSSYER LAPLLSAEHD 190 200 210 220 230 240 VDVETNPSEA LFHAADGNYD LLIVSLGLEN FDGLRLCSQA RSLERTRHVP ILAIAEAENN 250 260 270 280 290 300 ARLLRGLEIG VNDYLLRPVD KNELMARART QIRRRRYTDH LRDNVQHSIE MAITDGLTGL 310 320 330 340 350 360 HNRRYMESHL ATLAEQAGAR GKPLALMILD IDFFKSINDS YGHDAGDDVL REFALRIKKS 370 380 390 400 410 420 IRGIDLACRY GGEEFVIVMP ETDLHVAQMV AERLRRAIAG EPFAIEKGTR RIEVTISIGL 430 440 450 STLERKGEPI PDLLKRADTA LYRAKHDGRN RVVAAAA

References

[1]

"Complete sequence of Rhodopseudomonas palustris TIE-1." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Emerson D., Newman D.K., Roden E., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TIE-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001096 Genomic DNA. Translation: ACF02041.1.
RefSeq	YP_001992516.1. NC_011004.1.
3D structure databases
ProteinModelPortal	B3Q9Y8.
SMR	B3Q9Y8. Positions 2-457.
ModBase	Search...
Protein-protein interaction databases
STRING	395960.Rpal_3541.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACF02041; ACF02041; Rpal_3541.
GeneID	6411215.
KEGG	rpt:Rpal_3541.
PATRIC	23311582. VBIRhoPal88240_3590.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3706.
HOGENOM	HOG000167204.
KO	K02488.
OMA	RRYMETH.
ProtClustDB	PRK09581.
Enzyme and pathway databases
BioCyc	RPAL395960:GHPC-3573-MONOMER.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR011006. CheY-like_superfamily. IPR000160. GGDEF_dom. IPR001789. Sig_transdc_resp-reg_receiver. [Graphical view]
Pfam	PF00990. GGDEF. 1 hit. PF00072. Response_reg. 2 hits. [Graphical view]
SMART	SM00267. GGDEF. 1 hit. SM00448. REC. 2 hits. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit. SSF52172. CheY_like. 2 hits.
TIGRFAMs	TIGR00254. GGDEF. 1 hit.
PROSITE	PS50887. GGDEF. 1 hit. PS50110. RESPONSE_REGULATORY. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3Q9Y8_RHOPT

Accession

Primary (citable) accession number: B3Q9Y8

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	May 1, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)