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Protein

Glycogen synthase

Gene

glgA

Organism
Rhodopseudomonas palustris (strain TIE-1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei18 – 181ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciRPAL395960:GHPC-391-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:Rpal_0386
OrganismiRhodopseudomonas palustris (strain TIE-1)
Taxonomic identifieri395960 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001725 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 483483Glycogen synthasePRO_1000126095Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi395960.Rpal_0386.

Structurei

3D structure databases

SMRiB3Q9C2. Positions 5-481.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiNLQINGM.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

B3Q9C2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTLAVLSVA SELFPLIKTG GLADVAGALP AALRANDVAV TSLLPGYPAV
60 70 80 90 100
LGGIEDPQQV HSFNELFGGT ARLLAARCGD LDLFVLDAPH LYVRPGNPYV
110 120 130 140 150
GPDGKDWPDN GLRFAALAQV GAALGQGLLP HYKPDVLHAH DWQTGLLPAY
160 170 180 190 200
LKYSGRPGPK TVFTIHNLAF QGRFPYELLG RLGLPERAFG LDGIEYYGGI
210 220 230 240 250
GYLKAGLQLA DRITTVSPSY AAEIQGSEAG MGLDGLLQLR ADRLSGILNG
260 270 280 290 300
IDTDVWNPAS DALISATYDV ESIAARARNK KVLQARFGLK PEPGALLYGV
310 320 330 340 350
ISRLSWQKGL DLLLQALPQL IGGGAQLALL GSGDAELEQG YAAAARKYPG
360 370 380 390 400
QVGAVIGYDE ALAHQIQAGA DALLVPSRFE PCGLTQLCAL RYGAVPVVAR
410 420 430 440 450
VGGLADTVVD ANEMATATGV ATGVQFAPVT TDALIKAFGK TRALFADVVA
460 470 480
WRNLQINGMT TDVSWKNPAQ HYAKLYRDLV AER
Length:483
Mass (Da):51,044
Last modified:September 2, 2008 - v1
Checksum:iFD5B3EE17236EF52
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001096 Genomic DNA. Translation: ACE98946.1.
RefSeqiYP_001989422.1. NC_011004.1.

Genome annotation databases

EnsemblBacteriaiACE98946; ACE98946; Rpal_0386.
KEGGirpt:Rpal_0386.
PATRICi23305138. VBIRhoPal88240_0398.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001096 Genomic DNA. Translation: ACE98946.1.
RefSeqiYP_001989422.1. NC_011004.1.

3D structure databases

SMRiB3Q9C2. Positions 5-481.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395960.Rpal_0386.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACE98946; ACE98946; Rpal_0386.
KEGGirpt:Rpal_0386.
PATRICi23305138. VBIRhoPal88240_0398.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiNLQINGM.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciRPAL395960:GHPC-391-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TIE-1.

Entry informationi

Entry nameiGLGA_RHOPT
AccessioniPrimary (citable) accession number: B3Q9C2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: September 2, 2008
Last modified: April 29, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.