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B3Q874 (B3Q874_RHOPT) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=4.1.1.39 EMBL ACE98823.1
Gene names
Ordered Locus Names:Rpal_0263 EMBL ACE98823.1
OrganismRhodopseudomonas palustris (strain TIE-1) [Complete proteome] [HAMAP] EMBL ACE98823.1
Taxonomic identifier395960 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length432 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ACE98823.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B3Q874 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: FFE1CE2721CD87AE

FASTA43246,479
        10         20         30         40         50         60 
MTPDDIAGFY AKRADLDLDN YIELDFDFEC AGDPREAAAH LCSEQSTAQW RRVGFDEDFR 

        70         80         90        100        110        120 
PRFAAKVLEL SAEPRPSGFS VPVECAARGE VHACRVTIAH PHGNFGAKIP NLLSAVCGEG 

       130        140        150        160        170        180 
VFFSPGIPLI RLQDIRFPEP YLAAFDGPRF GIAGVRERLQ AFDRPIFFGV IKPNIGLPPQ 

       190        200        210        220        230        240 
PFAELGYQSW TGGLDIAKDD EMLADVDWCP LAERAALLGD ACRRASAETG VPKIYLANIT 

       250        260        270        280        290        300 
DEVDRLTELH DVAVVNGAGA LLINAMPVGL SAVRMLRKHA TVPLIAHFPF IAAFSRLANY 

       310        320        330        340        350        360 
GIHSRVMTRL QRLAGFDVVI MPGFGPRMMT PEHEVLDCIR ACLEPMGSIK PCLPVPGGSD 

       370        380        390        400        410        420 
SAATLENVYR KVGSADFGFV PGRGVFGHPM GPAAGATSIR QAWDAIAAGI PVADHAASHP 

       430 
ELAAALKAFG GR 

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris TIE-1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Emerson D., Newman D.K., Roden E., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TIE-1 EMBL ACE98823.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001096 Genomic DNA. Translation: ACE98823.1.
RefSeqYP_001989299.1. NC_011004.1.

3D structure databases

ProteinModelPortalB3Q874.
SMRB3Q874. Positions 1-429.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395960.Rpal_0263.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACE98823; ACE98823; Rpal_0263.
GeneID6407908.
KEGGrpt:Rpal_0263.
PATRIC23304876. VBIRhoPal88240_0269.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OMAFECAGDP.
OrthoDBEOG62K1SK.
ProtClustDBCLSK637929.

Enzyme and pathway databases

BioCycRPAL395960:GHPC-266-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 2 hits.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3Q874_RHOPT
AccessionPrimary (citable) accession number: B3Q874
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: January 22, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)