B3Q7R1 (B3Q7R1_RHOPT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent EMBL ACF01827.1
EC=1.17.4.1 EMBL ACF01827.1

Gene names

Ordered Locus Names:

Rpal_3325

Organism

Rhodopseudomonas palustris (strain TIE-1) [Complete proteome] [HAMAP]

Taxonomic identifier

395960 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	1257 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ACF01827.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA replication Inferred from electronic annotation. Source: InterPro
Cellular component	ribonucleoside-diphosphate reductase complex Inferred from electronic annotation. Source: InterPro
Molecular function	cobalamin binding Inferred from electronic annotation. Source: InterPro cobalt ion binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro ribonucleoside-diphosphate reductase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3Q7R1 [UniParc]. Last modified September 2, 2008. Version 1. Checksum: 2AC08343FB09F996	FASTA	1,257	138,045
	10 20 30 40 50 60 MKIERRYTKD GQSPYADIAF RLTTSEIRNP DGSVVFRLEN VEVPEFWSQV ASDVLAQKYF 70 80 90 100 110 120 RKAGVAARLK KVEEESVPSW LWRSVADTDA LTALPESERY TSEHSAKQVF DRLAGCWTYW 130 140 150 160 170 180 GWKGSYFSSE DDARAFFDEL RYMLAMQMVA PNSPQWFNTG LHWAYGVDGP GQGHYYVDYK 190 200 210 220 230 240 TGKLTKSKSA YEHPQPHACF IQGIEDDLVN DGGIMDLWVR EARLFKYGSG TGSNFSRLRG 250 260 270 280 290 300 EGERLSGGGK SSGLMSFLKI GDRAAGAIKS GGTTRRAAKM VVVDVDHPDI EAYIDWKVKE 310 320 330 340 350 360 EQKVAALVTG SKVNQKHLKA ILKACVNCQG SGDDCFDPEK NPALRREVKL ARRALVTDAM 370 380 390 400 410 420 IKRVIQFAKQ GYKEIDFPIY DTDWDSEAYL TVAGQNSNNS VSLKDDFLRA VETDGDWHLT 430 440 450 460 470 480 ARTNKKVVKT LKARDLWEKI GTAAWASADP GLHFNTTMND WHTCKASGDI RASNPCSEYM 490 500 510 520 530 540 FLDDTACNLA SANLLAFYDV GANRFDLDAY EHLCRLWTVV LEVSVLMAQF PSKQIAELSY 550 560 570 580 590 600 EFRTLGLGFA NIGGLLMTMG LSYDSKEGRA LCGALSAIMT GTAYATSAEM AAKLGAFPGY 610 620 630 640 650 660 KKNADHMLRV IRNHRRAAHG ESRVYEALSV NPVPLDHTNC PIPDAVAHAK AAWDKALELG 670 680 690 700 710 720 EQHGYRNAQV TVIAPTGTIG LVMDCDTTGI EPDFALVKFK KLAGGGYFKI INRAVPAALR 730 740 750 760 770 780 VLGYPEHQIQ EIEAYAVGHG SLSNAPAINA STLKAKGFTD EALAKVEKAL PTAFDIKFAF 790 800 810 820 830 840 NKWTFGEDFL KDVLKIEAEQ IAQPNFDLLT ALGFTKREIE AANIHICGAM TVEGAPHLKP 850 860 870 880 890 900 EHYAVFDCAN PCGKIGKRYL SVESHIRMMA AAQPFISGAI SKTINMPNDA TVEDCKSAYM 910 920 930 940 950 960 LSWKLALKAN ALYRDGSKLS QPLNSQLIAD DDEDEDIDTF LDKPMAARAT HISEKVVERL 970 980 990 1000 1010 1020 VERIVVMRER EKMPDRRKGY TQKAVVGGHK VYLRTGEYDD GRLGEIFIDM HKEGAALRSF 1030 1040 1050 1060 1070 1080 INNFAIAVSL GLQYGVPLEE YVDAFTFTRF EPAGPVQGND SIKYATSILD YVFRELAVSY 1090 1100 1110 1120 1130 1140 MGRFDLAHVD PTETGFDAIG KGVDEGKVPD GGVIAGPASA TKYLSKGLTR SRTDNLVVMR 1150 1160 1170 1180 1190 1200 STPAHPADTT PRNAPSGAAP TVTALASSRV GDALEGATAL KQEVQTDLSP TEKLEALQWS 1210 1220 1230 1240 1250 KATTAATQPA PSKAERRAEA KAKGYEGEMC SECGNFTLVR NGTCMKCDTC GSTTGCS

References

[1]

"Complete sequence of Rhodopseudomonas palustris TIE-1." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Emerson D., Newman D.K., Roden E., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TIE-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001096 Genomic DNA. Translation: ACF01827.1.
RefSeq	YP_001992302.1. NC_011004.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B3Q7R1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6410998.
GenomeReviews	Gene locus Rpal_3325 in contig CP001096_GR.
KEGG	rpt:Rpal_3325.
PATRIC	23311138. VBIRhoPal88240_3369.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG414188.
OMA	FLWRSVP.
ProtClustDB	PRK07562.
Family and domain databases
InterPro	IPR002876. DUF28. IPR017856. Integrase_Zn-bd_dom-like_N. IPR013344. RDP_Rdtase_AdoCbl-dep. IPR000788. Ribncl_red_lg_C. IPR013678. Ribonuc_red_2_N. IPR024434. TSCPD_dom. [Graphical view]
Gene3D	G3DSA:1.10.10.200. Intgrase_N_Zn_bd. 1 hit.
KO	K00525.
Pfam	PF08471. Ribonuc_red_2_N. 1 hit. PF02867. Ribonuc_red_lgC. 2 hits. PF12637. TSCPD. 1 hit. [Graphical view]
PRINTS	PR01183. RIBORDTASEM1.
SUPFAM	SSF75625. DUF28. 1 hit.
TIGRFAMs	TIGR02504. NrdJ_Z. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3Q7R1_RHOPT

Accession

Primary (citable) accession number: B3Q7R1

Entry history

Integrated into UniProtKB/TrEMBL:	September 2, 2008
Last sequence update:	September 2, 2008
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)