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Protein
Submitted name:

Ribulose bisphosphate carboxylaseoxygenase protein, large subunit

Gene

rbcL

Organism
Rhizobium etli (strain CIAT 652)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciRETL491916:GH4T-5382-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose bisphosphate carboxylaseoxygenase protein, large subunitImported (EC:4.1.1.39Imported)
Gene namesi
Name:rbcLImported
Ordered Locus Names:RHECIAT_PC0000964Imported
Encoded oniPlasmid pCImported
OrganismiRhizobium etli (strain CIAT 652)Imported
Taxonomic identifieri491916 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000008817: Plasmid pC

Interactioni

Protein-protein interaction databases

STRINGi491916.RHECIAT_PC0000964.

Structurei

3D structure databases

ProteinModelPortaliB3Q4C7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiMSIFKGV.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3Q4C7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MITLTYRIET PGSVEAMADK IASDQSTGTF VPVPGETEEL KSRVAARVLA
60 70 80 90 100
IRPLEDARHP TWPEASPGTL LHRADVDIAF PLEAIGTDLS ALMTIAIGGV
110 120 130 140 150
YSIKGMTGIR IVDMKLPEVF RSAHPGPQFG IAGSRRLTGV EGRPIIGTIV
160 170 180 190 200
KPALGLRPHE TAELVGELIE SGVDFIKDDE KLMSPAYSPL KERVAAIMPR
210 220 230 240 250
ILDHEQKTGR KVMYAFGISH ADPDEMMRNH DIVAAAGGNC AVVNINSIGF
260 270 280 290 300
GGMSFLRKRS SLVLHAHRNG WDVLTRNPGA GMDFKVYQQF WRLLGVDQFQ
310 320 330 340 350
INGIRVKYWE PDDSFVSSFE AVSTPLFDAA DCPLPVAGSG QWGGQAPETY
360 370 380 390 400
ERTGRTVDLL YLCGGGIVSH PGGPAAGVRA VQQAWQAAVA GIPLEVYAKD
410
HPELAASIAK FSDGKGA
Length:417
Mass (Da):44,832
Last modified:September 2, 2008 - v1
Checksum:i21715B76A2A2A67A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001077 Genomic DNA. Translation: ACE95034.1.
RefSeqiYP_001985584.1. NC_010997.1.

Genome annotation databases

EnsemblBacteriaiACE95034; ACE95034; RHECIAT_PC0000964.
GeneIDi6403851.
KEGGirec:RHECIAT_PC0000964.
PATRICi23104985. VBIRhiEtl120572_5702.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001077 Genomic DNA. Translation: ACE95034.1.
RefSeqiYP_001985584.1. NC_010997.1.

3D structure databases

ProteinModelPortaliB3Q4C7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi491916.RHECIAT_PC0000964.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACE95034; ACE95034; RHECIAT_PC0000964.
GeneIDi6403851.
KEGGirec:RHECIAT_PC0000964.
PATRICi23104985. VBIRhiEtl120572_5702.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiMSIFKGV.
OrthoDBiEOG62K1SK.

Enzyme and pathway databases

BioCyciRETL491916:GH4T-5382-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome diversity and DNA divergence of Rhizobium etli."
    Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., Palacios R., Davila G.
    Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CIAT 652Imported.

Entry informationi

Entry nameiB3Q4C7_RHIE6
AccessioniPrimary (citable) accession number: B3Q4C7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: February 4, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.