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B3Q3H9 (B3Q3H9_RHIE6) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
D-amino acid dehydrogenase small subunit HAMAP MF_01202
EC=1.4.99.1 HAMAP MF_01202
Gene names
Name:dadA HAMAP MF_01202
Ordered Locus Names:RHECIAT_PC0000659
Encoded onPlasmid pC EMBL ACE94736.1
OrganismRhizobium etli (strain CIAT 652) [Complete proteome] [HAMAP] EMBL ACE94736.1
Taxonomic identifier491916 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium

Protein attributes

Sequence length422 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Oxidative deamination of D-amino acids By similarity. HAMAP MF_01202

Catalytic activity

A D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor. HAMAP MF_01202

Cofactor

FAD By similarity. HAMAP MF_01202

Pathway

Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1. HAMAP MF_01202

Subunit structure

Heterodimer of a small and a large subunit By similarity. HAMAP MF_01202

Sequence similarities

Belongs to the DadA oxidoreductase family. HAMAP MF_01202

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding3 – 1715FAD By similarity HAMAP MF_01202

Sequences

Sequence LengthMass (Da)Tools
B3Q3H9 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 60CD2AF3A4E181C0

FASTA42245,698
        10         20         30         40         50         60 
MKVIVLGAGI VGVTSAYQLA KSGHEVTVVD RQSGPALETS FANAGEVSFG YCSPWAAPGI 

        70         80         90        100        110        120 
PAKAMKWLFM KHAPLILRPK LDMAMLAWMT RMLSNCTSER YAINKSRMLR LADYSRIALA 

       130        140        150        160        170        180 
ELRAETGIAY DERMQGTLQL FRTQQQLDAS AKDVKALAAD GIPYEVLDQD GCIRVEPALR 

       190        200        210        220        230        240 
HVREKIVGGL LTPKDETGDC FKFTNALAAQ AEALGVRFAY GTTIKALDVE AGRVRGVVTD 

       250        260        270        280        290        300 
RDPDRERQRM RAEAVVVALG SYSPLLLKPF GIRLPVYPVK GYSLTIPITD ASRAPESTVM 

       310        320        330        340        350        360 
DETYKIAITR LGDRIRVGGM AEISGYTNDL GLARRSTLEH SVTDLFPGGD VSKASFWSGL 

       370        380        390        400        410        420 
RPMTPDGTPV IGPTKIAGLF LNTGHGTLGW TMSTGSARLI ADLVSGAKPE INAKDLAISR 


YT

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References

[1]"Genome diversity and DNA divergence of Rhizobium etli."
Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., Palacios R., Davila G.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CIAT 652 EMBL ACE94736.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001077 Genomic DNA. Translation: ACE94736.1.
RefSeqYP_001985286.1. NC_010997.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB3Q3H9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6403546.
GenomeReviewsGene locus RHECIAT_PC0000659 in contig CP001077_GR.
KEGGrec:RHECIAT_PC0000659.
PATRIC23104394. VBIRhiEtl120572_5407.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG729204.
OMALEHAGGQ.
ProtClustDBPRK00711.

Family and domain databases

HAMAPMF_01202. DadA.
[Tree]
InterProIPR023080. D-aa_DH_ssu_DadA.
IPR006076. FAD-dep_OxRdtase.
[Graphical view]
KOK00285.
PfamPF01266. DAO. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3Q3H9_RHIE6
AccessionPrimary (citable) accession number: B3Q3H9
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: January 25, 2012
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info