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B3Q2Q8 (B3Q2Q8_RHIE6) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Nitrogenase protein alpha chain RuleBase RU004022
EC=1.18.6.1 RuleBase RU004022
Gene names
Name:nifD1 EMBL ACE93964.1
Synonyms:nifD3 EMBL ACE94048.1
Ordered Locus Names:RHECIAT_PB0000255 EMBL ACE93964.1, RHECIAT_PB0000345 EMBL ACE94048.1
Encoded onPlasmid pB Ref.1 EMBL ACE93964.1
OrganismRhizobium etli (strain CIAT 652) [Complete proteome] [HAMAP] EMBL ACE93964.1
Taxonomic identifier491916 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium ›

Protein attributes

Sequence length500 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

8 reduced ferredoxin + 8 H+ + N2 + 16 ATP + 16 H2O = 8 oxidized ferredoxin + H2 + 2 NH3 + 16 ADP + 16 phosphate. RuleBase RU004022

Sequence similarities

Belongs to the nifD/nifK/nifE/nifN family. RuleBase RU004021

Sequences

Sequence LengthMass (Da)Tools
B3Q2Q8 [UniParc].

Last modified September 2, 2008. Version 1.
Checksum: 1D41C0AEF7A608FC

FASTA50056,286
        10         20         30         40         50         60 
MSLDYENDSV LHEQLIAEVL AQYPDKAAKR RKKHLSVATS GDEPGDEPKA LSECDVKSNI 

        70         80         90        100        110        120 
KSIPGVMTIR GCAYAGSKGV VWGPVKDMVH ISHGPVGCGH YSWSQRRNYY VGLTGIDTFV 

       130        140        150        160        170        180 
TLQFTSDFQE KDIVFGGDKK LEQVIDEIEE LFPLNNGISV QSECPIGLIG DDIEAVSRKK 

       190        200        210        220        230        240 
AKEHEKTIVP VRCEGFRGVS QSLGHHIAND AIRDWVFDKN EVEFETGPYD VNVVGDYNIG 

       250        260        270        280        290        300 
GDAWATRILL EEVGLRVVGN WSGDATLAEV ERAPKAKLNL IHCYRSMNYI CRHMEEKYGI 

       310        320        330        340        350        360 
PWMEYNFFGP SQIETSLREI AKHFGPEIVD KTEAVITKYR PLVDAVVDKY RPRLEGKTVM 

       370        380        390        400        410        420 
LYVGGLRPRH VITAYEDLGM RIVGTGYEFA HNDDYQRTGH YVNKGTLIYD DVTGYELEKF 

       430        440        450        460        470        480 
IEGIRPDLVG SGIKEKYPVQ KMGIPFRQMH SWDYSGPYHG YDGFAIFARD MDLAINNPVW 

       490        500 
DLYDVPWKKK AAPAEAVAAE

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References

[1]"Genome diversity and DNA divergence of Rhizobium etli."
Gonzalez V., Acosta J.L., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.L., Fernandez J.L., Diaz R., Flores M., Mora J., Palacios R., Davila G.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CIAT 652 EMBL ACE93964.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001076 Genomic DNA. Translation: ACE93964.1.
CP001076 Genomic DNA. Translation: ACE94048.1.
RefSeqYP_001984514.1. NC_010996.1.
YP_001984598.1. NC_010996.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING491916.RHECIAT_PB0000345.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACE93964; ACE93964; RHECIAT_PB0000255.
ACE94048; ACE94048; RHECIAT_PB0000345.
GeneID6402759.
6402849.
KEGGrec:RHECIAT_PB0000255.
rec:RHECIAT_PB0000345.
PATRIC23102817. VBIRhiEtl120572_4619.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2710.
HOGENOMHOG000005528.
KOK02586.
OMALTRRNQT.
ProtClustDBCLSK864414.

Enzyme and pathway databases

BioCycRETL491916:GH4T-5660-MONOMER.
RETL491916:GH4T-5750-MONOMER.

Family and domain databases

InterProIPR000510. Nase/OxRdtase_comp1.
IPR010143. Nase_comp1_asu.
IPR000318. Nase_comp1_CS.
IPR005972. Nase_Mo-Fe_asu.
[Graphical view]
PfamPF00148. Oxidored_nitro. 1 hit.
[Graphical view]
TIGRFAMsTIGR01862. N2-ase-Ialpha. 1 hit.
TIGR01282. nifD. 1 hit.
PROSITEPS00699. NITROGENASE_1_1. 1 hit.
PS00090. NITROGENASE_1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3Q2Q8_RHIE6
AccessionPrimary (citable) accession number: B3Q2Q8
Entry history
Integrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: May 29, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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